Squalius cephalus (European chub): 307156068
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Entry
307156068 CDS
T11930
Symbol
sall1a
Name
(RefSeq) sal-like protein 1a isoform 1
KO
K19871
sal-like protein
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307156068 (sall1a)
03036 Chromosome and associated proteins [BR:
scep03036
]
307156068 (sall1a)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
307156068 (sall1a)
Chromosome and associated proteins [BR:
scep03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
307156068 (sall1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2H2_11
Teflon_C
zf-C2HC_2
DUF4633
dsrm
zf-C2H2_2
zf-Di19
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
307156068
NCBI-ProteinID:
XP_079723399
LinkDB
All DBs
Position
3:25785203..25798223
Genome browser
AA seq
1305 aa
AA seq
DB search
MSRRKQAKPQHFQSDSQLVPTEHNGDTETNLDVSPCKDSGAHVCSRCCEEFFELSDLEQH
QKNCTKNQLVLIVNENPVSPSGTFSPGSSPHNPDEQMNDTTNNTDQAELTDLLEQNILDK
EEAMDTEMSGVSAPHNDGSGCMAGGSPLSGVGSSHGALGSSGSSMGNSVISVSLPQLGNL
TELGNFSMINSNVIIENLQSTKVAVAQFSQETRGAGGQRVAVPALMEQLLALQQQQIHQL
QLIEQIRHQILLLASQSPELQAPPSSSPVTLGSGTSPLTTLSSHLSQQLAAAAGLAQSIA
SQSASISSLKQMANVVQLPQSNSSVGESSQSLGAPVPATVNAQPSEKRPSNAGSLHPQLG
NPSLAKSSTPAFAMGSLLNPVANTLLPQPPPGNPIFSSALPSVGTTVEDLNSLAALAQQR
KGKPPNVSSFEPKSSSEDTFFKHKCRFCGKVFGSDSALQIHLRSHTGERPYKCNICGNRF
STRGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSMPPEKPVTSWLDSKP
VLSTLTSSVGMLLPPTIPSLPPFIKKEENNSLAISSPSHSAKSDSGPADTPMKNTESVLE
EGESTTLPTSNGKAEENNQSSSLTTSMSSAVEGTIEYTTSNSPPMATNPLMPLMSEQFKA
KFPFGGLLDPLQGSETSKLQQLVENIDRKLTDPNECVICHRVLSCQSALKMHYRTHTGER
PFKCKVCGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQ
IPNTPFPDNYPESMGSDAGSFDERNFDDLDFSDENMEGIEDGPDSSIPDTPKSADASQDS
LCSSPTPHESLGMESQKCANQGAVEEVQCDQGKSLENGLMEGDRLTNDSSSLGGDFESQS
AGSPAVSESTSSMQAPSPSNGTIQQPKSPSLEDRQQRALSLEHISACLMQSHSASPGALD
LSSINSSKDPLSMLFPFRERGTLKNTACDICGKTFACQSALDIHYRSHTKERPFICTACN
RGFSTKGNLKQHMLTHQMRDLPSQLFEPNTSLASSPTPSLLSVGPLTSMMKTEVNGFLHS
FQPEVKDLPSALVTSSASTSPVLSTAPPRRTPKQHYCTTCGKTFSSSSALQIHERTHTGE
KPFACTICGRAFTTKGNLKVHMGTHMWNSAPARRGRRLSVDGPMAFLGTNPVKFPELFQK
DLTSRAGNGDPTSFWNQYAAAFSNGLAMKTNEISVIQNGGLPPPLSGSVGNGGSSPIGGL
TGSMEKLHNSEPNPALAGLEKMANTENGTHFRFTRFMEDKEIVTN
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggaaacaagcgaagccgcagcatttccagtccgactcgcagctggtccca
accgagcacaatggggacacagagaccaacctggacgtctccccctgtaaagactcgggt
gcccatgtctgcagcagatgttgcgaagagttctttgaactatcggaccttgaacaacac
cagaagaattgcactaagaatcaattagttctaattgtgaatgaaaatccagtgtctcct
tccggaaccttctccccaggatcctctcctcataatcctgatgagcagatgaatgataca
actaataacacagatcaagcagagttgaccgaccttttggagcagaacatacttgacaaa
gaggaggccatggacacagagatgtcaggagtctctgcaccccataatgatggaagtgga
tgtatggcaggtggcagcccactcagtggtgttggaagcagccatggagctctgggcagc
tctgggtccagtatggggaactctgtcatctctgtctcactacctcagctgggtaacttg
actgagttgggcaatttttccatgatcaacagcaacgtcattattgaaaacctacagagc
accaaagtggctgtggcccagttctctcaagagaccagaggagcgggagggcaaagggtg
gctgtgccagccctcatggagcagctcttggccctacagcaacagcagatccatcagcta
cagctcatcgagcagattcgtcaccagattcttctgctagcgtcacagtcacctgagctt
caagcaccacctagttcttcccctgtgactttaggttcaggtactagcccgctaaccact
cttagttcccatttatctcaacagttggcagctgctgcagggttggcacagagcatagct
agccagtctgcaagcattagcagtttgaaacagatggctaatgttgtgcagctacctcag
agcaattccagtgtgggagagtcatctcaaagcctcggcgcaccagtgccagctacagtt
aatgcccaaccttcagagaagaggccaagcaatgcaggaagcttgcatcctcagttagga
aacccatcacttgcaaagtcatccacacctgcctttgcaatgggaagccttttgaatcct
gtggctaatacccttctacctcagcccccaccaggcaacccaatattttccagtgcactg
cccagtgtcggtaccacggttgaggatctcaactcactggctgcattggctcagcaaaga
aaaggcaagccacctaatgtctcatcttttgaaccgaagagtagctctgaggatacgttt
ttcaagcataagtgcaggttttgtggcaaggtgtttggtagtgacagtgcgttgcagatt
cacttacgttctcacacaggtgagaggccatacaagtgtaacatatgtggcaaccgcttt
tccacccgtggtaacttgaaggttcattttcagcgtcataaagagaagtatccacatatt
cagatgaacccataccctgtcccagagcatctagacaatattccaacgagtactggcatt
ccctatggtatgtctatgcctcctgagaagccagtgactagctggctcgatagtaaacct
gttctgtctactctgacatcttctgttggcatgttacttccaccaaccataccaagcctg
cctccattcatcaagaaagaagagaataactcattggctataagcagcccttctcattct
gcaaaaagcgactcaggtcctgctgatacacctatgaagaacacagaaagtgtgttggaa
gaaggtgagagcacaaccctgcctacctcaaatggaaaagctgaagaaaacaatcagtca
tccagtttaacaacaagcatgagctctgcagtggagggtaccattgagtacaccacctcc
aacagccctccaatggccactaacccactcatgcccctgatgtcagaacagttcaaagct
aagtttccattcggaggtctccttgatcctctccaaggctcagaaacatctaagcttcag
cagcttgttgagaacattgacaggaagttgacagaccccaatgagtgtgttatctgccac
cgtgttcttagttgtcagagtgcactgaaaatgcactaccgcacacacactggggagagg
cctttcaaatgtaaagtgtgtggtcgtgccttcaccaccaagggcaacctcaagactcat
tacagtgtccatcgagctatgccgccactgagggtccagcattcctgccctatttgccag
aagaagttcacaaatgctgtggtactgcagcagcatattcgcatgcacatgggtggccag
atccccaacaccccttttcctgacaactatccagaatccatggggtccgatgctggctca
tttgacgagagaaattttgatgatcttgacttctctgatgaaaacatggaaggaattgag
gatggaccagacagcagtattccagacacaccaaagtcagctgatgcatctcaagacagc
ctctgttcatcccctactccacatgagtcattaggtatggagagccagaagtgtgccaac
cagggagcagtagaggaagtgcagtgtgaccaagggaaatcattggagaacggattaatg
gaaggagacagactcacaaatgactcctcttcacttggaggcgacttcgaaagccaaagt
gccggaagtccagctgtctctgaatctacctcttccatgcaagctccatcaccctctaat
ggtactatccaacagccaaagtctccgagtctggaggatcgacagcagagggcattgtca
ttggagcacattagtgcatgtctcatgcagtctcattctgccagtcctggagctctggat
ctttcttcaattaactcatcaaaagatcctcttagcatgcttttccccttccgtgagcga
ggcaccctaaagaatacagcatgtgacatctgtggcaagacatttgcctgccagagtgcc
ttggacatccattaccgtagccataccaaagagagaccgttcatttgcacagcatgcaac
cggggattttccaccaaggggaacttgaagcaacatatgctgacgcatcagatgcgagat
ttgccctcccagctcttcgagcccaacaccagtcttgcctccagcccaactccatccctt
ctgtctgttgggccattgacctccatgatgaagaccgaggtcaacggctttctgcatagt
tttcaacctgaagtaaaagacttgccctcagcattagtgacctcatctgcttccacttct
ccagtactttcgactgccccaccacggaggacgcctaagcagcactactgtaccacttgt
gggaagacattttcctcctccagtgccctgcaaatccatgagagaacccatacaggagag
aagccctttgcttgtaccatatgtggacgagcatttaccaccaaaggaaatctcaaggtg
catatgggtacccacatgtggaacagtgctcctgcacggcgtggtcgcaggctttcagta
gatggtcccatggctttcctgggcaccaaccctgtaaagtttcctgagctcttccaaaag
gacctaactagtagagctggaaacggagacccaaccagcttctggaatcagtatgctgct
gctttctctaacggcctggccatgaaaaccaacgagatctctgtcatccagaatggaggt
ctaccccctccactgtcagggagtgtgggcaatgggggcagttctccaatcggaggcttg
acgggcagcatggaaaagctgcataactctgagcccaatcctgctctggctggcctagag
aaaatggcaaacacagagaatgggactcacttccgcttcacacgcttcatggaggacaag
gagatagtgacaaactag
DBGET
integrated database retrieval system
