Squalius cephalus (European chub): 307156354
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Entry
307156354 CDS
T11930
Symbol
clcn3
Name
(RefSeq) H(+)/Cl(-) exchange transporter 3 isoform 1
KO
K05012
chloride channel 3/4/5
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307156354 (clcn3)
Ion channels [BR:
scep04040
]
Chloride channels
Chloride channel (CLC)
307156354 (clcn3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
307156354
NCBI-ProteinID:
XP_079723769
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All DBs
Position
3:7747963..>7820018
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AA seq
871 aa
AA seq
DB search
MESEQLFTRGYGRNSYNSITSASSDEELLDGAGVIMDFHTTEDDNLLDGDASPGSNYAMS
NGGGGGGASSSTHLLDLLEEPIPGVGTYDDFHTIDWVREKCKDRERHRKINSKKKESAWE
FTKSLYDAWSGWLVVTLTGLASGALAGLIDIAADWLNDLKEGVCLSAMWFNHEQCCWGSN
ETTFAERDKCPQWKTWAELILGQAEGPGSYIMNYFMFTFWALSFAFLAVSLVKVFAPYAC
GSGIPEIKTILSGFIIRGYLGKWTLLIKTVTLVLAVASGLSLGKEGPLVHVACCCGNIFS
YLFPKYSKNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAAL
VAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRR
RKSTRFGKYPVLEVITVAAITAIVAFPNPYTRQNTSELIKELFTDCGPLESSQLCQYRSQ
MNGSQAYPQGSDATTTPGVYSAMWQLSLALVFKIIMTIFTFGLKVPSGLFIPSMAIGAIA
GRIVGIAVEQLAYYHHDWFLFREWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIV
FELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAREV
MRPRRSDPPLAVLTQDDMTLAELQAIISETNYNGFPVIVSKESQRLVGFALRRDITIAIE
NTRRKQEGIMLNSRIYFTQHAPTLPADSPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRK
LGLRQCLVTHNGIVLGIITKKNILEHLEELKQHVEPLAPPWCYYKKRYPPSHGPDGKPRS
RVHNVQLASSSSRNEEDESEEEVRLLDNPSL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgagcagttgttcaccagaggctacggcaggaacagctacaacagcatcacg
agcgctagcagtgacgaagagcttctcgatggagccggcgtcatcatggacttccacaca
acagaagacgacaaccttctcgacggggacgcgtctccagggtcgaactacgccatgtct
aacgggggtggcggaggcggggccagtagctccacacacctgctggacctgctggaggag
cccattcccggtgtgggaacctacgacgacttccacaccatcgactgggtccgggagaag
tgcaaagaccgagagcgccaccgcaagataaacagtaaaaagaaggaatcagcatgggaa
ttcacgaagagtctgtacgacgcctggtcagggtggctggtggtcacgctaacaggactt
gcatcaggagcgttagctgggctgattgacatcgcggccgactggttgaacgatctgaag
gagggcgtgtgtctcagtgccatgtggtttaatcacgagcagtgttgctggggctccaac
gagaccacgtttgctgagagagacaagtgtcctcagtggaagacatgggctgaactcatc
ctgggtcaggccgagggtcccggctcctacatcatgaactacttcatgttcacgttttgg
gcgctgtcctttgccttcctggccgtgtctctggtgaaggtgtttgcgccgtacgcctgc
ggctctggaatacctgagattaaaaccatcctgagcggcttcatcatccgagggtacctg
ggcaagtggaccctgttgataaagaccgtcactctggtcctggccgtggcgtcgggcctc
agtctcgggaaggaagggccgctggtccacgtggcctgttgctgtggcaacatcttttcc
tacctcttccccaaatacagcaaaaacgaggccaagaagcgagaggtgctgtcggcggct
tcggctgctggcgtgtcggtggcgtttggcgctcccattggaggagttttgttcagtctg
gaggaggtcagttactacttccccctgaagacgctgtggcgctcgttcttcgcggctctg
gtggcggcgttcgtgctgcgctccatcaacccgttcgggaacagccggctggtgctgttt
tacgtggagtaccacacgccctggtacctgttcgagctgttccccttcatcctgctgggg
gtgttcggaggcctgtggggggccttcttcatccgggccaacatcgcctggtgccgacgc
cgcaagtccacgcgcttcggcaagtacccggtgttggaggtgatcacggtggcggccatc
acggctatcgtggcgttcccgaacccgtacacgcgtcagaacaccagcgagctgatcaag
gagctgttcaccgactgcgggccgctggagtcgtcgcagctctgccagtatcgcagtcag
atgaacggcagccaggcgtatccgcagggatcggacgccaccaccacccccggggtttac
tccgccatgtggcagctcagcctggctctcgtcttcaagatcatcatgaccatcttcacc
ttcggcctgaaggtgccgtcgggtctgttcatccccagtatggccatcggtgcgatcgct
gggaggattgtaggcatcgctgtggagcagttggcgtactatcaccacgactggttcctg
tttcgagagtggtgtgaagtgggcgccgactgcatcactccgggactgtacgccatggtg
ggcgccgcggcctgtctcggtggcgtgacccgtatgacggtgtctctggtggtcatcgtg
ttcgaactgaccggcggcctggaatacatcgttcctctcatggcggcggtgatgaccagc
aaatgggtgggcgatgcgttcggcagagaggggatttacgaagcccacatccgtctgaac
ggataccccttcctggacgccaaggaagagttcacacacaccacgctggcgagggaagtg
atgcgtccgcggcgtagcgacccgccgctggcagtgctgacgcaggacgacatgactctc
gccgagctgcaggccatcatctccgaaaccaattacaacggcttccccgtcatcgtctcc
aaagagtcgcagaggctggtgggcttcgctctgcgcagggatataaccatcgccatagaa
aacacccgccgtaagcaggagggaataatgctgaactcgcggatctattttacccagcat
gccccgacccttcccgcagacagcccgcggccgctgaagctgcgcagtattttagacatg
agccccttcaccgtcaccgaccacacgccgatggagatcgtggtggacatcttccgcaaa
ctcggcctgcgccagtgccttgtgacgcacaacgggattgtattgggcatcatcacaaag
aagaatattttagagcatctggaagagctcaagcagcacgtggagcccttggcgcctcct
tggtgttattacaaaaaaagatatcctccgtcacatggcccagatggcaaaccaagatcc
cgagtccataatgttcaactagcgtcctcctcttcccgaaatgaggaagatgagagtgaa
gaggaggtccgtttactggacaatccatctctctga
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