Squalius cephalus (European chub): 307156482
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Entry
307156482 CDS
T11930
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform 1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
scep Squalius cephalus (European chub)
Pathway
scep04010
MAPK signaling pathway
scep04020
Calcium signaling pathway
scep04148
Efferocytosis
scep04218
Cellular senescence
scep04310
Wnt signaling pathway
scep04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
307156482 (nfatc3a)
04310 Wnt signaling pathway
307156482 (nfatc3a)
04020 Calcium signaling pathway
307156482 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
307156482 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
307156482 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
307156482 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307156482 (nfatc3a)
Transcription factors [BR:
scep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
307156482 (nfatc3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
DUF2861
Motif
Other DBs
NCBI-GeneID:
307156482
NCBI-ProteinID:
XP_079723991
LinkDB
All DBs
Position
3:complement(23903971..23985293)
Genome browser
AA seq
1079 aa
AA seq
DB search
MTTANCPGNEELDFRLIFGEDGQQPPLGPADLETDDNTSFYILNVGQPPLLVNQSHGLQR
HGGPPPAQLIATSPSLQAHQKTYEQGYEHQDSKYTPTGMGGGGNGPPKAFECPSIQITSI
SPSCQQEMEASDDEMRAKGPDGDYHDRPLSRDHLYLPLDHSYRDSSLSPSPCSSLSSRSW
FSDASSCESISHVYDDVDSELNEAAARFTLGSPLTSPGCSPQAGPQEEVWQQQQQQQHHH
HHHQAFTHSLSHSHGHSLSPRQSPCHSPRTSVTDENWLSPRSPSRPSSRPTSPCGKRRHS
SADICCLGSLSPHHSPTATPGPSPRGSVTEDTWIGSPSMGMSPFQCCPSEADIPSKTRKT
SQDCTAAIQTGKGDMSMDDSGNVSPLLDSPGEDAMHGLKKDGSGEQFLSVPSHFTWNKPK
PGHTPIFRASSLPPLDWPLPNQYGQYELKIEVHPKAHHRAHYETEGSRGAVKAASGGHPI
VKLVGFSEKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIVITSTKVLEIPL
LPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVVSLQAA
SIPVECSQRSAQELPQVEKASISSFPVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWE
VEAKIIREKSQGSSIVVEVPPYHSKTVTSAVQVQFYMCNGKRKRSQSHRFTYLPVLVKQE
HRDDLDSPAVPPMSMPLVHAASLVCAQPLSSPEHSHPPDGLMSSSPRGLAAGLHPLQAPC
APMGSPTLPHLPHLQAQGLNAPPECQMPFHPGPSATARPSYPPIQHNMPFNGQHSLPMTA
GSAQGYERMPFQADPSGCHNLGLGMVYGPASSTPTSGVPPGSGPNLSHAACTGSNQVMAH
SAPHLHSLGYHCPTPGQVPSPTHTLGQQVPQLQRPLVYHPAGQRSASCPTPSSAPSRMVP
SPHSGPSSPQIHSLPYHSPTSPSPTSSSPLGPMALSGQPSPQASSPVLAGLSPSGPLVHP
LTQQEEGLNIKQEPEDREPTFRTIGLQDITLDDVNEIIGRDMSQAPGAHGGSPSAHSQS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaaactgccccgggaatgaagagctggacttcagactgatcttcggggag
gacgggcagcagccgccgttaggccccgcagatctagaaacggatgataacacctcattt
tacatcctgaatgttggccaacctcctttactggtgaaccaatcacacggtctccagcgg
catggaggcccgcccccagcccaactcattgccacctccccctccctgcaggcccaccaa
aagacctatgagcaaggctatgagcatcaggactctaaatacacgcccacagggatgggt
ggaggagggaacggcccaccaaaggcctttgaatgtcccagcatccagatcacctccatt
tccccaagctgccagcaggagatggaggccagcgacgatgagatgagagcaaagggtccg
gatggagactaccacgacagacctctgtctcgagaccacctatacctgcctctagatcac
tcgtatcgagattcgtccctgagcccgagtccatgtagcagcctttcctcacgaagctgg
ttctcagacgcatcgtcctgcgaatccatctcacatgtgtacgatgatgtggattcggaa
ctaaatgaagcagcggcgcgttttaccctgggctcaccgctcacttcgcctggctgctct
ccacaggctggaccacaggaggaagtatggcaacagcagcagcagcagcagcatcatcat
catcatcaccaggccttcactcactccctttctcactcacacggccattctctctcgccc
cgccagtcgccctgtcactcgccccgtaccagcgtcacagatgagaactggctgagccca
cgttcaccttcacggccctcttcgcgcccgacatcgccctgtgggaagagacgccactcc
agtgctgatatatgctgcctgggctctttatcaccccatcactccccgactgccactccc
ggcccctcgcccaggggcagcgtgaccgaagacacctggataggaagcccatccatgggt
atgtctcctttccagtgttgtccctctgaggctgacatcccctccaagaccaggaagacc
tcccaggactgtacagcagcaatccagacagggaagggcgatatgagcatggatgattct
gggaatgtatctcctttgcttgactcacctggtgaggatgccatgcatggattaaagaag
gatggatctggagagcagtttctttctgtcccatctcacttcacatggaacaaacccaaa
ccaggacacacacctattttcagggcatcatccctgcctcccctggactggcctttgcca
aatcagtatgggcagtatgaactaaagattgaggttcaccccaaagctcatcacagagct
cattatgagaccgaaggcagccgaggtgctgtcaaagccgcgtctgggggacaccctatc
gtcaagctcgttggcttcagtgagaagccagtgaacctgcagatgttcattgggacagcg
gatgaccgttatttgaggccgcatgcattctaccaggttcaccgtatcacaggaaaaact
gttgccacagcaagccaggaaattgtcatcaccagcacaaaggttctcgagattcctctc
cttcctgaaaacaatatgtctgccagtattgactgtgctggaatcttgaagttgaggaac
tctgacatcgagctgagaaaaggagagactgatattggacgaaaaaacactcgggtccgc
gtggtgttccgggttcacatcccacaacctaatggaaaagtggtctcactgcaggctgct
tcaattccagtggagtgctcccaacgctcagcacaggagttacctcaggtggagaaggcc
agtattagcagctttccagtgagtggaggagaggaaatggttatcactggctccaacttc
ttccctgagtcaaaggtcatttttctggagaaaggtccagatggaagaccgcagtgggag
gtggaggcgaagatcatcagagaaaagagtcaaggatcaagcattgtggtggaggtgcct
ccttatcacagtaagacggtcacttcagctgtgcaggtgcagttctacatgtgcaatggc
aaacggaaaaggagtcaatcacaccgctttacctatctgccagtcctggtcaagcaggaa
catagggatgatctggactcccctgccgtgccgcccatgtctatgcctctggtccatgct
gccagtttggtctgcgctcagccgctgtcctccccagagcactcccacccaccagacggc
cttatgtctagctccccacgtggcctggctgcaggcctgcacccactccaggccccctgc
gccccaatgggctccccaactcttccccacctgccccatcttcaggctcaagggctgaat
gcgcctcccgaatgccagatgcccttccacccaggcccttctgccactgccaggccatct
tacccacccatacagcacaacatgcccttcaacggccagcacagtcttcctatgactgcg
ggctccgcacagggctacgagaggatgcccttccaggccgatccatccgggtgtcacaac
ctgggtttggggatggtgtatggcccggcttcttcaacacccacctctggagtgccgccg
gggtctggccccaacctcagccatgcagcctgtacaggtagcaaccaggtcatggcccac
tctgcccctcaccttcactctctaggctatcactgccccactccagggcaggtcccatca
cccacccacacgctgggacagcaggtcccacagctgcagcgtccactggtttaccatcca
gctgggcagcggtctgcctcctgcccaacaccctccagtgctccctctcgtatggtgcca
tctccccactctgggccctcgtccccccagatccattccctcccctaccattcacctacc
tccccgtctcctacttccagcagccccttggggcccatggcactctctggacagccttcc
ccacaggctagcagccctgttttggctgggttgtccccttcaggtcctttggtacacccc
ctgacccaacaggaagaggggctgaacatcaaacaggagccagaagatagagagcccact
ttccgtaccattggcttgcaggacattacgcttgacgatgtgaatgagatcataggcaga
gacatgtctcaggccccaggggctcatgggggctctccatctgcacatagtcagtcctag
DBGET
integrated database retrieval system
