Squalius cephalus (European chub): 307157757
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Entry
307157757 CDS
T11930
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform 1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
scep Squalius cephalus (European chub)
Pathway
scep03250
Viral life cycle - HIV-1
scep04144
Endocytosis
scep04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
307157757 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
307157757 (hgs)
04145 Phagocytosis
307157757 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307157757 (hgs)
Membrane trafficking [BR:
scep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
307157757 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
RasGEF_N_2
UIM
CID
FYVE_CARP1-2
Cnd1
Motif
Other DBs
NCBI-GeneID:
307157757
NCBI-ProteinID:
XP_079725806
LinkDB
All DBs
Position
1:complement(51336677..51359269)
Genome browser
AA seq
797 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIGAIKKKLNDKNPHV
ALYALEVLESVVKNCGQTIHDEVACKQTMEELKELFKKQPEPNVKNKILYLIQAWSHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFEILNNHSPEENEGPKKMSEQPSVN
SEEQKKQTSSHPSLSPPPRKAEGKAASAGQSELPPEYLTSPLSQQSQVVPTEAMPPKRDE
AALQEEEELQLAIALSQSEAEEKERMRQKNPYSAYPKADPTPVTSSAPPVSNLYSSPVNS
SAPSAEDVDPELARYLNRTYWEKKQEEVRKSPTPSAPAPVSLAEPVPISQPVESHAPVQP
INIVEQQYQNGESEENHEQFLKALQNAVTTFLNRMKSNHMRGRSITNDSSVLSLFQSINN
MHPQLLEILNQLDEKRMYYEGLQDKLAQVRDARAALNALREEHREKLRRAAEEAERQRQI
QLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQMRLEQQKHTIQMRAQMPAFSLPYS
QMQSLPPNVAGGVGYPPAGPPSYPGTFSPAGSVEGSPMHGVYMNQPGQTSAGGPYQAMPA
DPNMVNAYMYQPAGTSGQPVAPGQAPPTTTPAYTNYQPTPTQGYQNVVSQAQSLPPMSQA
PPTNGIAYMGYQPYNMQNMMNALPGQDPNMPPQQPYMPGQQPMYQQMAPPGGPQQQSQQQ
HPQAPPGSAEAQLISFD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggcggcggaacatttgagagactgttggataaggctaccagccagctgctg
ctggagaccgactgggagtccattctgcagatatgtgacctcattcggcaaggcgatacg
caggcgaaatatgcaattggtgccatcaagaaaaaactcaatgacaaaaatccacatgta
gcgctctatgctcttgaggtcctggagtcagtggtgaagaactgtggccagacgattcat
gatgaagtggcctgtaagcagaccatggaagagctgaaggagctgttcaagaaacaaccc
gaaccgaacgtgaagaacaagatcctttatctgatccaggcctggtcccacgctttccgc
aacgagcccaagtacaaagtcgtccaggatacctatcagatcatgaaggtggaaggtcat
gtcttcccagagttcaaggagagtgatgccatgtttgcagcagagagggcccctgattgg
gtggatgcagaggaatgtcacagatgtagagttcagtttggtgttatgactcgaaagcac
cactgcagggcatgtgggcagattttctgtgggaagtgctcttcgaagtactctaccatt
cccaagtttggcattgagaaggaggtgcgagtgtgtgagccctgctttgagattctcaac
aaccacagtccggaagaaaatgaggggccaaaaaaaatgagtgagcaaccaagtgtaaac
agtgaggaacaaaagaaacaaacatcaagccacccgtccctctctccccctcctagaaaa
gctgaagggaaggccgccagcgctgggcagtccgagcttccccctgagtacctgaccagc
cctctgtcccagcagtctcaggtagtgcccaccgaagcaatgcctccgaaaagagacgag
gccgcgctgcaggaggaagaggagctgcagctggccatcgcactgtctcagagcgaagcg
gaggagaaggagaggatgagacagaagaacccttactctgcttaccccaaagcagatccc
acccctgtgacttcctccgcccctcctgtcagcaatctctactcctcacctgtgaactca
tcggctccatcagccgaagacgtggatccagagctggcccgttacctgaacagaacttac
tgggagaagaaacaggaagaggttcgcaagagtcccaccccctcagctcctgctcctgtt
tcattggctgagcccgtgccaatcagccaaccagtggaaagccacgctcctgtccaaccc
atcaacatagtggagcagcagtatcagaatggagaatctgaggagaaccatgagcagttc
ctgaaggccttgcagaatgccgtcaccactttccttaaccgcatgaagagcaaccacatg
cgtggccgcagcatcaccaatgacagctccgtgctctctctcttccagtccatcaacaac
atgcacccacagctgctggaaatactcaaccagctggatgaaaagagaatgtactatgag
ggtcttcaggacaagctggcgcaggtgcgtgacgcgcgggcggcactgaacgctctgaga
gaggagcaccgggagaagctgcgacgggctgccgaggaggctgagagacagagacaaatc
cagctcgcccagaaactggagatcatgaggcagaagaaacaggagtatctggagatgcaa
aggcagctggcgattcagcgcctgcaggagcaggagaaggagagacagatgcgcctggag
cagcagaaacacaccattcagatgagagcacagatgcctgccttctctctgccttactca
cagatgcagtcgctgcctcctaacgttgccggaggggtggggtatccccccgctggccct
cccagttatccgggcacgttcagtcctgctggttcagtggaggggtcgcccatgcatgga
gtctacatgaaccagcccggacagacgtctgctggtggcccgtaccaggccatgcctgca
gatcccaacatggtaaacgcttacatgtatcagcctgctggcaccagcggacagccagtc
gcccctggacaagcccctcccacaaccacccctgcctacactaactaccagcccacaccc
acacagggctaccagaacgtggtgtcccaagctcagagtttgccccctatgtcccaggct
ccccccaccaatggtattgcctacatgggctaccagccatacaacatgcagaatatgatg
aacgctcttccaggacaagaccccaacatgcccccccaacagccctacatgcctgggcag
cagcctatgtaccagcagatggctccccctggtggtccgcagcagcaatcccaacagcag
cacccgcaggctcctccgggcagtgcagaggctcagctcatttcattcgactga
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integrated database retrieval system
