Squalius cephalus (European chub): 307158169
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Entry
307158169 CDS
T11930
Symbol
mtnr1c
Name
(RefSeq) melatonin receptor type 1C
KO
K04285
melatonin receptor type 1A
Organism
scep Squalius cephalus (European chub)
Pathway
scep04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307158169 (mtnr1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
scep04030
]
307158169 (mtnr1c)
G protein-coupled receptors [BR:
scep04030
]
Rhodopsin family
Others
Melatonin
307158169 (mtnr1c)
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
TMEM116
7tm_4
Motif
Other DBs
NCBI-GeneID:
307158169
NCBI-ProteinID:
XP_079726633
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Position
5:complement(37884325..37906321)
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AA seq
360 aa
AA seq
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MAMIKSNLSCLDSLSPGNNCLPARNTSPGVAATLAGVLIFTTVADILGNLLVILSVYRNK
KLRNAGNIFVVSLSVADLVVALYPYPLALFAIFHNGWKMGSLHCQLSGFVMGLSVIGSVF
NITAIAINRYCYICHSLRYDRLYSRRNTCLYLLLTWMLTALATVPNFLVGSLKYDPRIFS
CTFTQTASSSYTICVVLIHFLLPLGVVSFCYLRIWTLVIRVKSRVRPNPKVRAADMRNFL
TMFVVFVLFAVCWAPLNFIGLAVAVNPARVAPNVPEWLFITSYFMAYFNSCLNAVVYGLL
NQNFRQEYKQILRALCTPRALFSESSRYNTEAMKSKQSPAGTNNNVKETNMYKGGVTTLF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgattaagtcgaacttgagctgtctggatagtttatccccgggaaacaactgc
ctccccgccaggaacacgtctcccggggtagcggccaccctcgccggcgtgctgatcttc
acaaccgtggctgatatccttggaaatctactggtcatcctgtccgtgtacaggaacaag
aaactgaggaatgcaggtaacatctttgtggtgagtctttctgttgctgacctggtggtg
gcgctgtacccctaccccttggctctgttcgctatcttccacaatggctggaaaatgggc
tccctgcactgccagctgagtggctttgtaatgggactgagtgtgatcggttcggtcttc
aacatcacggctatcgccatcaaccgctactgctacatctgccacagtcttcgctacgac
cgactgtattcgcgccggaacacctgcctgtacctgctgctcacctggatgctaaccgct
ttggccaccgtgcccaacttccttgtgggctccctaaaatacgacccacgcatcttctcc
tgtaccttcacccaaactgcaagctcctcttatacaatctgtgttgttctgatccacttc
cttctcccgctgggtgtggtttctttctgttacctgcgtatatggacattggtgattagg
gtcaaaagtcgtgtccggcccaatccaaaggtcagagcagctgacatgaggaatttcctg
acgatgtttgtggtgttcgtactgttcgccgtgtgctgggcgcccctgaacttcattggg
ctcgccgtggcggttaaccctgcaagagtggcgcccaatgtcccggagtggctgtttatt
accagctactttatggcatatttcaacagctgtctgaatgctgttgtctacgggttgctc
aaccagaactttaggcaagagtataaacagattcttcgtgctctctgcaccccaagagcg
ctgttcagtgaaagttcaaggtacaacactgaagccatgaagagtaaacagtcaccggcg
ggaactaataataacgtgaaagagaccaacatgtataagggcggagtaactactcttttc
tag
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integrated database retrieval system