Squalius cephalus (European chub): 307158183
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Entry
307158183 CDS
T11930
Symbol
tenm1
Name
(RefSeq) teneurin-1 isoform 1
KO
K24473
teneurin
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scep04990
]
307158183 (tenm1)
Domain-containing proteins not elsewhere classified [BR:
scep04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
307158183 (tenm1)
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GFIT
Other DBs
NCBI-GeneID:
307158183
NCBI-ProteinID:
XP_079726653
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All DBs
Position
5:38522145..38702904
Genome browser
AA seq
2722 aa
AA seq
DB search
MDEKLYQSLTRPHPGLELSYSSSSDEEDGTNLHHKHYREAHTRPDYEPDRRFTYNSHKVR
RKPLEHPQNDFSDPSQTVFPDFQTELHAANQELAYPGGVSASVPSDPESEGGASPDHALR
LWMQEVKSEHSSCLSSRANSVLSLTDTEQERKSEPENDLPSSPVAQFTFRPLPPPPPPPH
ACTCARPAPAPLPEVVQRSTLPARCQPLESGNKAGQDDNGQTHNTWALNSNIPLETRHFL
FKHGSGSSAIFNAANQNYPLTSSTVYSPPPRPLPRTTLSRPLFSFSKPYRCCNWKCTALS
ASAITLTLALLLTYIIVVHLLGLPWHLKRVEGELYENGMSKDDQPLPGADFTFTPVHLPG
LNTTQPDKEVIQRGRVIERGEVAVGTQLVQAIPPGLFWRFHIMVHHPEYVKFNISLTRDA
LLGIYGRRNIPPTHTQFDFVKLLDGRQLIKQDSRNVKTPNAPPRSLLMSALQETGFVEYL
DVGTWYLAFYNDGRKMEQVVVYSTPIETIDGCSTNCNGNGECVAGHCHCFTGFLGPDCSK
DSCPVLCSGNGDYEKGVCVCHTGWKGAECEVEEGQCIDPTCSNNGECVNGICVCAPAFKG
DNCEQVDCVDRLCSGRGVCVRGECVCSAGWGGESCETALPACKEQCSGHGTYQAQTGGCV
CEPGWSGDDCTMEVCPVPCSTHSVCVAGRCQCEEGWEGTTCDKQACHPTCEEHGECRDGQ
CVCQPGWEGEHCTIAAHYLDLFDKDACPGLCNGNGRCTLEQSGWHCVCQSGWSGPGCNVV
METECNDSKDNDSDGLVDCVDPDCCSQQMCVSAPLCQGSPDPRDIIQQSHAPFETRPSRQ
FFDRVRFLIGRDSTHILPGDLPFDSSRVCVIRGQVLASDGTPLVGVNVTFQHNPEYGYTL
SRQDGSFDLLAVGGISVTLLFQRAPFLSQIRSVWLPWNQFMVLDRVFMERAESKPPVCDL
KNLISPHAVVLSAPLPRFAADCEDRGTVVPELQAVQEEVVIPATILKLSYLSSRTPGYRS
LLRVVLTHSTFPPGLAKVHLSVAVQGRQLLKSFPAAPNLIYVFSWNKTDIYGQQVTGLVQ
AHVSVGYEYESCLDVVLWEKRVAQLQGFELMPSNLGGWTLNQHHILNLESGILHKGNGEN
VFISQQPLVISTVMGTGAVRAIPCPNCNGPAVEQKLFAPIALACGSDGSVYVGDFNYIRR
ILPNGFSISILELRNRDIRHSSSPAHKYYLSMDPVHESLYLSDTSSGKLYRLKTLTEPKD
ISRNVEVVAGSGEQCTPFHPNQCGDGGKATEAALSNPRGIAVDKHGFIYFVDGSTIRKID
DKGVITTVIGSNGLTSSQPISCDSRMDISQVRLEWPTDLAVSPLDNSLYVLDNNLVLQVS
ESQQVRVVAGRPIHCPMASIEPVILGKTAVRSVLEGAKAIAVSHQGALYIAETDDRKHSR
IQEVSTNGEMVVIAGATSECDCKIDPNCECFSGDGGYARDAKLKSPSSLAVSPNGSLYIA
DLGNVRIRRLTANHPQLTPEGLFELTSVADQELYLFSPNGTHLFTLSLVTGDYLLNFTYT
LEGHLSSIASREGTIAQLRRDANGVPLWLVAPGGQVYWLTISNAGMLKRISALAHDLAQL
SYYGNTGLLATISNENGWTTVYEYNSDGHLINMTLPTGEVSSFHGNMEKAVRVEATASNR
ENFIIITNHSADNTIYTLRQAHSVSVYGVRDDGSLWVTYASGMDVTLSTEPTVSSGLLPG
ASAGLVHPTVGRCNITLPGEPAHSLIEWRQRREQAKGNYTAYERRLRAHNRNVLSIDYSQ
ESRVGKIYDDHRKFTLRVQYDDKGRPVLWTPSKYNQVRVSYSSEGLVTSIQRGNWTERRD
YDNGRIITRTWANGKIWSYTFLEKSVQLLLHSQRRYTFEYDQTDCLLSVTLPSMVRHSLQ
TSLSVGYYRNTYTPPDSPTSCFTQDYAHDGRLLQSLYLGTGRHVIYKYSRVARLAEILYD
STLITFTYDEATGAVKTIHLMHEGFVCTIRYRQTGPLVSRQIYRFSEEGLVNARFDYSYN
NFRVTSMQAMINETPLPIDLYRYVDVSGRIEQFGKFSVINYDLNQVITTHAMKHTKIFNP
TGQVIEVQYEILKSIAYWMTLQYDSMGRVINCDIRIGVDSNITRYAYEYDADGQLQTVAI
NDRPQWRYSYDLNGNINLLSHGNSARLTPLRYDLRDRITRLGEIQYRTDEDGFLRLRGNL
LFDYGSNGLLLGAYDRDSGQRMWYRYDGLGRRVASRSSDGAQLQFFYADLMEPTRVTHLY
NHSSAEITSLYYDLQGHLIAMEMSSGEEFYIACDNAGTPLAVFSSRGHVVKEIRYTPYGD
VYRDSNPTFPLVFGFQGGLYDSFTRLVHLGRRDYDVVAGRWTTPNHELWAELSVNPKPFN
LYSFRNNYPLGNLQDVTKFTTDISSWLQLFGFQLHNVVPGFPKPKVENTEQTYEMMATQI
RTQTWDTSKIVLGIQCDLQKHLKNFISLDRLPMTPANGKIGGRQGRMPIFSAISSIFGKG
VKFAVRDGVVATEIIGVASEDSRRVAAVLNGALYLRGLHFTVEGRDTHYFTKAGPLEADL
GVAGGGAGGGVRVLENGVNVSVSQISAMVGGEMRRFADIVLQQGALSFNIRYGATPEEER
TRVLEAARIRAVQGAWLREQKRVLEGEGGSLSWTDKEKDELIAEGRVSGYDGFYALPVEQ
HPELADSPFNIHLIRHVETGRR
NT seq
8169 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaagctttaccaatctctgacccgaccccaccccggcctggagctcagttac
tccagctcatctgatgaagaggatggtaccaaccttcatcacaaacactacagagaggcg
cacacccgccccgattacgagcctgaccgcagattcacctacaacagccacaaagtccgc
aggaaacccttggagcatccccagaatgatttctcggacccctcccagactgtgttccct
gatttccagacagagcttcacgcagccaatcaggagcttgcttacccgggaggcgtgtct
gcaagtgttccctccgatcctgaatccgagggcggcgcctcccccgaccacgccctgcgg
ttgtggatgcaggaagtgaagtcagagcacagttcctgcctgtcgagccgagcgaactca
gttctgtccctcactgatacggaacaagagcgcaagtctgagccagagaatgatctccct
tccagccctgtggctcagttcacctttcgacctctgccccctcctcctccgccgccccac
gcatgcacctgtgcccgtccagcaccggctccccttccagaggtggtgcagaggagcacg
ctgcccgcccgatgccaaccgctggaatctgggaataaagctggacaggatgacaacggg
cagacgcacaatacctgggcactgaacagcaacataccactagagaccaggcacttcttg
ttcaagcacggttcgggttcgtctgccattttcaacgcagccaatcagaattaccctctg
acatccagcacggtgtattcgccgcctccgaggcctctacccagaaccaccctctccaga
ccactcttctcattcagtaaaccctatcgctgctgtaactggaaatgtacggctttgagc
gccagcgcaattacgctgactctcgctctactgctgacgtacatcatcgtcgttcatttg
ctggggttgccgtggcatctgaagcgagtggaaggagagctctatgagaacggtatgagt
aaagatgatcagcctctgcccggagccgatttcaccttcactcctgtccacctgccagga
ctcaacaccacacagccagataaagaggtgattcagcgaggcagggtgatagagagggga
gaggtggctgtcgggacacagctggtccaagcaattcctcctggactcttctggaggttt
cacattatggttcaccaccctgagtatgtcaagttcaacatctcactcacgcgagatgct
ctgctgggtatctacggtcggaggaatataccacctactcacacgcagtttgactttgtg
aagttgctggatgggagacagctgataaagcaggattcccggaatgtcaaaactccgaac
gctcctccacggagtctgctgatgtctgcgctgcaggagacaggttttgtggaatatctt
gatgtaggcacctggtacctggctttctataatgatggtcgcaagatggaacaggtggta
gtgtacagcacacccattgaaaccatagacggttgctccactaactgtaacggtaacgga
gagtgtgtcgctggacattgtcactgttttactggcttcctggggccagattgttcaaaa
gactcttgcccagtgctgtgtagtggtaatggcgattacgagaaaggtgtgtgtgtgtgt
cacactggatggaagggggcggagtgtgaggtggaggaaggccagtgtatcgatcccacc
tgttccaacaatggagaatgtgtcaacggaatctgtgtgtgtgctcctgcattcaagggc
gataactgtgagcaagtcgattgcgtggatcgcttgtgctcaggtcggggggtgtgtgtg
cgcggtgagtgtgtgtgttccgcaggctggggaggtgagagctgtgagacggcacttcct
gcctgtaaagagcaatgttcaggtcatggaacataccaagcccagacaggggggtgtgtg
tgtgagccgggctggagtggcgacgactgcaccatggaggtttgccccgttccctgcagc
acccatagtgtgtgtgttgctggacgttgccagtgtgaggaggggtgggaagggaccact
tgtgacaaacaggcatgccatccaacctgtgaagagcatggagagtgcagggatggacag
tgtgtctgtcagcctggttgggagggagagcactgcactattgcagcacattacctggat
ctgtttgataaagatgcatgtcctgggttgtgtaacggtaatggacgctgtacactggag
cagagcggttggcattgtgtgtgccagtcgggatggagtggcccgggctgtaacgtcgtc
atggaaaccgagtgcaatgacagtaaagataatgacagcgatggtctcgtggactgtgtc
gacccggactgttgtagtcagcagatgtgtgtgagtgccccgctgtgccaaggctcgcct
gacccacgtgacatcattcagcagagccacgcccctttcgagacacgcccttcacgtcag
ttcttcgatcgtgtgcgatttctcattggacgggacagcacacacatactgccaggagac
ctgccatttgacagcagtcgagtgtgtgtaattcgaggacaggttttggcctctgatgga
actcctctcgttggcgtgaatgtcacgtttcagcataaccctgaatatggatacacactc
agccgacaggacggcagctttgatcttctggcagtgggcggaatctctgttactctattg
ttccagcgagctccatttttgtcccagattcgttctgtctggcttccttggaaccagttc
atggtcctggaccgagtttttatggaaagagctgaatccaaaccacctgtctgtgacctg
aaaaacctgatcagtccacacgccgttgttctctccgcccccctcccacgattcgccgcc
gactgtgaggacagaggaactgtcgtacctgagctacaggcggtccaagaggaggtggtt
atccccgctacaattctgaagttaagctacctctcgtccagaactccaggctatcggtct
ctcctgagggtggttctgacccactccaccttcccgccgggcttggccaaagtccatctg
tctgtggccgtccagggtcggcagcttttgaaatcatttcctgccgctccaaacctcata
tatgttttctcttggaataaaaccgacatctatggacagcaggtcacggggctggtgcag
gcacacgtctctgttggatacgagtatgaatcgtgtctggacgttgtgctctgggagaag
agagttgctcagctgcagggctttgagttgatgccatccaacctgggcggatggacactg
aaccagcaccacatcctcaacctggagagtggtatccttcataaaggaaatggagagaat
gtctttatttctcagcagcctctggtcatctccacagtgatggggacaggggcggtccgt
gccatcccatgcccaaactgcaacggcccagctgtggagcagaaactgtttgcccccatc
gctctggcctgtggctcggatggaagtgtgtatgtaggtgattttaactacatccgcagg
attctgcccaatggattctccatcagcatcttggagctcagaaatcgtgacattagacac
agctccagtccggctcataagtactacttgtctatggaccctgtgcacgagtcgctctac
ctgtcggacacaagcagcgggaagctgtaccgcctgaagactctgactgaaccgaaagat
atcagcaggaacgtggaggtggtggctggcagcggggagcagtgcacacccttccaccca
aaccagtgcggcgatggaggcaaggccactgaagcagcgctcagtaaccccaggggtatc
gcagtggacaaacacgggttcatttactttgttgacggatcaacgatccgtaagattgat
gacaaaggagtgataacaaccgtcattgggtcaaacggactcacctcctcccagccaatc
agctgcgactctcgaatggacatcagccaggtgcgtttagagtggcccacagacctggca
gtgagtccgctggataactctctctacgttcttgataataaccttgtgctccaggtgagc
gagtcccagcaggtgcgagtggttgccggacgacccatccattgccccatggccagtatt
gaaccggtgattctggggaaaacagcggtgcggtctgtgctggaaggagcaaaagctatt
gccgtcagccaccaaggggctttgtacatcgccgaaaccgacgaccggaagcatagccgc
atacaagaagtgtctacaaatggagaaatggttgtaatcgcgggtgcgaccagtgaatgc
gattgtaagattgatcccaactgcgagtgtttctcaggtgatggaggttacgctcgcgac
gccaagctgaagtctccctcatctctggcagtttctcctaatggctccctctacatcgct
gacctcgggaatgtgcgtatacgtcggctcaccgctaaccatccacagctcactcccgag
gggctgttcgagctcacctcggtggcagatcaagagctctacctgttcagtccaaatggt
actcacctgttcaccctcagcctggtaaccggggactacttgctcaacttcacatatacc
ctcgagggccacctgagcagcatagcaagcagggagggcacgatagcgcagttgcggcgg
gatgctaatggcgtgcccctgtggctcgtagccccgggcggccaggtttactggctgacc
atcagcaatgccgggatgctgaagcgcatctcggctctcgcgcacgacctcgcacagctc
agttactacggcaacacagggctgctcgctaccatcagcaatgagaacggctggactact
gtctacgagtataactctgacggacacctcatcaacatgaccttgccgactggagaggtc
agcagtttccatggaaacatggagaaagctgtcagagtggaagccactgcctcgaacaga
gaaaactttattataattacaaaccactctgcggataacaccatctacacacttcgacaa
gctcactctgttagtgtgtacggtgttcgagatgacggctctctatgggtgacatatgcc
agcgggatggacgttactctcagcactgaaccaaccgtgtcatcggggttgttgccaggg
gcatcggcaggcctcgtccatcccacagtcggaaggtgcaacatcacgttgccaggggaa
ccagctcacagcctgatagaatggagacaaagacgtgaacaggccaaagggaattacaca
gcatatgaacggagactgagggctcacaacaggaatgtgttgtctatagactatagtcaa
gagagtcgggttgggaagatctatgatgaccatcgcaagttcactctgcgtgttcagtat
gatgacaaaggcaggcctgtgctctggacccccagtaaatacaatcaagtgcgagtatcg
tactcgagcgaaggtctggtcaccagcatacagagaggcaactggaccgagcgtagggac
tacgataacggacgcatcatcacacggacctgggccaatgggaagatctggagctacact
tttctggaaaagtctgttcagctgttgttacacagtcagcggcgctatacatttgagtac
gatcagacggactgtctgctgtcagtcactctccccagcatggtgagacacagcctgcag
acctctctatctgtgggctactaccgaaacacctacaccccacccgactcacccacctcc
tgcttcacgcaagactacgcccacgatgggcgcctgctccagagcctgtacctgggcaca
ggcaggcatgtaatctataaatacagccgagtggcccggctggctgagatcctctatgat
tcaacacttattaccttcacctacgacgaggcaacaggtgctgttaaaaccatccacctg
atgcatgaaggattcgtttgcaccatccgctacagacagacaggtcctcttgtgagtaga
caaatatatcgtttcagcgaagaaggattggttaatgctcgcttcgactacagctacaac
aacttcagagtcaccagcatgcaagctatgatcaacgaaacaccacttccgattgacctc
taccgctacgtggacgtgtcgggacgaatcgagcagttcgggaagttcagcgttatcaac
tacgacctgaaccaggtcatcaccacacatgccatgaagcacactaaaatcttcaaccca
actgggcaagtaatcgaggttcagtatgagattctgaaatccatcgcctactggatgaca
ctgcagtacgacagcatgggacgtgtcataaactgtgatattcgcatcggtgtggacagc
aacatcacgcgctatgcgtacgagtatgacgcagatgggcagttgcagacagtcgctata
aatgaccgcccacagtggcgttacagctacgacctaaatggaaacatcaacttactgagt
cacggtaacagtgcacgtttgacaccgctacgctatgatctccgtgaccgcatcacacgc
cttggagagatccagtaccgcaccgatgaggacgggttcttgcgtctccgtggcaatctt
ctctttgattacggttcgaatggactgcttttgggcgcctacgaccgggacagcggacag
aggatgtggtaccgttacgatgggctcgggaggagagtggccagccgtagtagcgatgga
gcacagctgcagttcttctacgctgatctgatggaaccgacacgggtgacgcacctgtac
aaccacagtagtgcggagatcacttccctctattatgaccttcaaggacacctcatcgcc
atggagatgagcagcggcgaggaattctatatagcatgtgacaatgctggaactcctctt
gcagttttcagtagtcgcggccacgtggtgaaggaaattcggtacacaccgtatggagac
gtttaccgagattccaaccctacctttcctctcgtctttggctttcagggtggtctctat
gactctttcacgcggttggtgcatctcggccgacgcgactatgacgtggtagctggaaga
tggacgactcccaatcacgaattgtgggcagagctgagtgtgaatcccaagccatttaat
ttgtattcatttaggaacaattatcctctgggaaacttacaggatgtaaccaagttcaca
acagatatcagtagctggctgcagctctttgggttccagcttcataatgtggttccaggg
ttccccaaaccaaaggtggagaacacagagcaaacatatgagatgatggccacacagatc
cgcacacaaacctgggacaccagcaagattgtactcggcatccagtgtgaccttcagaag
cacttgaaaaactttatttcgttggatcgcctccccatgacgccagccaatgggaaaatt
ggaggtcggcagggtcgcatgccaattttctctgccatttcttcaattttcggcaaaggt
gtgaaatttgccgtccgtgatggagtggtggcaactgagataatcggcgtggcaagcgag
gatagccgtcgtgtggcggctgtgctgaacggtgctttatacctgcgtggcctccatttc
acagtggaagggcgtgacacacactatttcaccaaggccggcccacttgaggcagatctg
ggagtggccgggggcggtgccggaggcggagtcagagtgttggagaacggcgtaaacgtc
tctgtttcccagataagtgctatggttggaggggaaatgcggcgattcgctgacattgtg
ctccagcagggggcgcttagctttaacattcgctacggagcaacgccggaggaagaacgc
acacgtgtgctggaggcggcacgaatacgagctgtgcaaggggcatggctacgggagcag
aaaagggtcctggagggggagggcggaagtttgtcatggactgataaagaaaaggatgag
cttattgcggagggccgtgtctcagggtatgatgggttctacgctctgcctgttgaacaa
caccctgagctcgcagacagccccttcaacattcacctgatcagacatgtggaaactggt
cgcaggtaa
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integrated database retrieval system