Squalius cephalus (European chub): 307158632
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Entry
307158632 CDS
T11930
Symbol
msi1a
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform 1
KO
K14411
RNA-binding protein Musashi
Organism
scep Squalius cephalus (European chub)
Pathway
scep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
307158632 (msi1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307158632 (msi1a)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
307158632 (msi1a)
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GFIT
Other DBs
NCBI-GeneID:
307158632
NCBI-ProteinID:
XP_079727498
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Position
5:46403976..46457625
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AA seq
432 aa
AA seq
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MKAGGGGARESERAEPTTRVREKSNGRRGLSVCANPAWPVLLQTGPSLPHPLGPPALELE
TPGSRSAQSGQQRDTGMDTEGSQSSLSSSTQDSPHDPCKMFIGGLSWQTTQEGLKEYFCK
FGEVKECMVMRDPVTKRSRGFGFVTYVDQTGVDKVLAQNRHELDSKTIDPKVAFPRRAQP
KLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDV
VEKVCEIHFHEINNKMVECKKAQPKEVMSPTGTARGRSRVMPYGMDAFMLGIGMLGYPGF
QAATYASRGYTGITPGYTYQFPEFHLERTPLLTSSHPQEITAIPLTAYGPMAAAAAAAVV
RGAQNQLYYGSTPSRAGFLGTSSPGPMADLYAAANQDSVSSYISAASPAPSTGFGHGLGG
PLIATAFTNGYH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaggagggggcggggccagggagagcgagagggcggagccgacaaccagagtc
cgggaaaagtcaaacgggaggcggggcctcagtgtctgcgcaaaccccgcttggcccgtc
ctcctccagacgggcccctccctcccccaccccctcgggccacccgctcttgagttggag
actcctggctcccgttcggctcagtccgggcaacagagggacacgggaatggacacagaa
gggagtcagagcagcctgtcgtcctccacgcaggactccccgcacgacccctgcaaaatg
ttcatcggcgggctgagctggcagacgacacaagagggactgaaggaatacttttgtaaa
ttcggcgaggtgaaggagtgtatggtgatgcgggatccggttacgaagcggtcgaggggc
tttggatttgtcacctatgtagaccagaccggtgtggataaagttttggcccaaaacaga
cacgagttggattcaaaaacaattgaccctaaggtggccttcccacgtagagctcagccg
aagctggtaacaagaacaaagaagatctttgttggagggctgtctgtcaacaccaccatc
gaagatgtgaaacagtatttcgatcagttcggaaaggttgatgacgcgatgctaatgttt
gacaaaaccaccaacaggcacagaggttttggctttgtgacctttgagaatgaagacgtg
gtggaaaaggtctgcgagatccactttcatgagatcaacaacaagatggtggagtgcaag
aaggcgcagccgaaggaagtgatgtcaccgacaggtacggcgcgaggccgctccagggtg
atgccctacggcatggacgccttcatgctggggatcggcatgctgggttacccagggttc
caggcggccacctacgccagtcgtggctacacaggaatcacaccaggatacacataccag
ttcccagaattccatttagaacggacaccccttctgacttcctctcacccccaagagatc
acagccattccactgactgcctatggaccaatggcagcggccgcagctgcagcggtggtc
agaggtgcgcaaaatcagctctattatggttccaccccgtcacgcgccgggttcctgggc
accagcagccctgggccaatggcagacctttatgcagcagccaatcaggattcagtcagc
agctacatcagtgcggcaagccccgcccccagcacggggttcggacatggacttgggggc
cctttgattgcaactgccttcaccaatggctaccactga
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