Squalius cephalus (European chub): 307158916
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Entry
307158916 CDS
T11930
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform 1
KO
K13210
far upstream element-binding protein
Organism
scep
Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307158916 (fubp3)
03041 Spliceosome [BR:
scep03041
]
307158916 (fubp3)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
307158916 (fubp3)
Spliceosome [BR:
scep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
307158916 (fubp3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_KHD4_2nd
HTH_cyano
Motif
Other DBs
NCBI-GeneID:
307158916
NCBI-ProteinID:
XP_079728043
LinkDB
All DBs
Position
5:49803696..49849168
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AA seq
603 aa
AA seq
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MMMMAELVQGQASVAQAGMKADGFTDPFHRARQIAKMSGEQIPHLNNSSPVVDASLYGYG
GQKRSLDEGVANQLGAMVHGTRAIITEDYKVPDKMVGFIIGRGGEQITRIQLESNCKIQI
AADSGGMMDRPCTLTGTPESIEQAKRLLGQIVDRCRNGPGFHSQMDGNSAVQEILIPASK
VGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLRITGDPYKVQQARELVVEIIR
EKDQGDFRSGRSDFGSRLGSSIDVLHTQVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF
KPDDGISPDRIAQVMGQPDRCQHAVHLINDLVQTAQERDGFGGPVGPRGRGRGRGDWNMG
TPGGLQEVTYTIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFSIRG
SPQQMEMARQLIDEKIGASGMGGNSSFGLSPFTQGPATPHQNGPQTFMTGGWGTTYQTWQ
PQSQQDPSHNGSQTGQMDYSKAWEQYYKKLDADEADDESRRSETLETLADHELLTCQQNQ
GQSSGSDYSKAWEEYYKKQTQGAGPGSQQSSPPDYSAAWVEYYRQQGAYYNQGQTQAPGL
PDH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctggtgcagggacaggcctcggtggctcaggccgggatgaag
gctgacggattcacggacccgtttcaccgtgcgcgacagattgctaagatgagtggagag
cagattccgcatctgaacaactcgtccccagtcgtcgacgcttcgctctatggctacggc
ggccagaaacgctctctggacgaaggagtggcgaaccagctcggtgcaatggtacatggt
acaagggctataataacagaagactacaaagtgcctgataagatggttggattcataatc
ggacggggcggcgaacagatcacaagaattcagctggaatcaaactgcaagatccagatc
gctgccgacagtggagggatgatggacaggccttgcaccctgactgggaccccagagagc
atcgagcaagcgaagaggttgttggggcagatcgtggaccggtgtcggaacgggccgggc
ttccacagtcagatggacgggaacagcgccgtccaggagatcctgatcccggccagtaaa
gtcggcctggtcatcgggaaaggaggcgacaccatcaaacaacttcaggagaggacagga
gtgaagatgatcatgattcaggacgacccgatgcccactggatcagacaaacccttgaga
atcactggagacccttataaagttcagcaagcgcgggagctggtcgtggagatcatcagg
gaaaaggatcagggagatttcaggagcggccgcagtgacttcggatccaggctgggaagc
agcatcgatgttttgcacacacaggtggcagtgcccaggtttgccgttggaatcgtcatt
ggcagaaacggggagatgatcaagaagattcagaacgatgcgggtgtcaggatccagttt
aagccagatgatgggatcagtcccgaccggatcgcacaggtcatgggtcagcccgaccga
tgtcaacacgccgttcacctcatcaatgatctggtccaaacagcacaggagcgtgatggt
tttggaggtccggttggacccagaggtcgtggcagaggtcgtggtgattggaacatggga
actcctggaggcttgcaggaggtcacctacacaataccggcggataagtgtggacttgtg
atcgggaaaggtggagagaccatcaagaacatcaaccagcagtccggcgctcacgtggag
ctgcagagaaaccctcctcccaacaccgatcccaacgtcaggatcttctccatccgcggg
tctcctcagcagatggagatggcccgacagctgatcgacgagaagatcggggcatctgga
atgggaggaaacagcagctttggactcagtcctttcactcaaggaccagcgactcctcat
cagaatggtccgcagacgttcatgaccggcggatggggaaccacatatcagacatggcaa
ccccagagccaacaggatcccagtcataatggatctcagaccggccagatggactattcc
aaagcgtgggagcagtattataaaaagctagatgcggacgaagctgatgatgaatcgaga
cgctctgagacgctggaaacactggcggatcatgagctgctcacatgtcaacagaaccaa
ggccagagcagcggatccgactacagcaaagcatgggaggagtattacaagaaacagact
cagggagccggtcctggttctcagcagagttctcctccagattacagcgccgcctgggtg
gagtattacagacagcagggggcgtattacaaccagggacaaacacaggctcccggcctc
ccggatcattaa
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