Squalius cephalus (European chub): 307159286
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Entry
307159286 CDS
T11930
Symbol
LOC307159286
Name
(RefSeq) tubulin beta-4B chain
KO
K07375
tubulin beta
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04145
Phagocytosis
scep04517
IgSF CAM signaling
scep04540
Gap junction
scep04814
Motor proteins
scep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307159286 (LOC307159286)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
307159286 (LOC307159286)
09144 Cellular community - eukaryotes
04540 Gap junction
307159286 (LOC307159286)
09142 Cell motility
04814 Motor proteins
307159286 (LOC307159286)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
307159286 (LOC307159286)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scep03036
]
307159286 (LOC307159286)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scep04812
]
307159286 (LOC307159286)
04147 Exosome [BR:
scep04147
]
307159286 (LOC307159286)
Chromosome and associated proteins [BR:
scep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
307159286 (LOC307159286)
Cytoskeleton proteins [BR:
scep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
307159286 (LOC307159286)
Exosome [BR:
scep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
307159286 (LOC307159286)
Exosomal proteins of colorectal cancer cells
307159286 (LOC307159286)
Exosomal proteins of bladder cancer cells
307159286 (LOC307159286)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
307159286
NCBI-ProteinID:
XP_079728674
LinkDB
All DBs
Position
5:31087620..31092908
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaattgttcacctgcaagctggtcaatgtggaaaccaaatcggtgccaaattt
tgggaggtgataagtgatgagcacggaattgacccgacaggaacttaccatggggacagt
gatctgcagttggagcggattaatgtgtactacaatgaagccactggtggaaagtatgtt
cctcgtgctgttcttgtcgacctggagcctggaaccatggattcagtgagatctggacca
tttgggcaggtcttccgaccagataactttgtctttggtcagagtggtgctggaaacaac
tgggccaagggtcactacacagaaggtgctgagcttgtagactctgttcttgatgtggtc
cgtaaggaggcggaaagctgcgactgcctgcaaggcttccagctcacccactcccttgga
ggaggcaccgggtcaggcatgggcacgctcctcattagcaaaatccgtgaggagtaccca
gaccgcatcatgaacaccttcagtgtagtgccctcacccaaagtctcagacactgttgta
gagccttacaatgccacactgtccgtccatcaactggtggagaacacagatgaaacgtat
tgcatcgacaacgaggcgctgtatgacatttgcttccgtacactcaaactcactacaccc
acctacggcgatctcaaccacctcgtgtctgccacaatgagcggggtcaccacctgcctg
cgcttccccggccaactcaatgctgacctgcgcaaactggctgtcaatatggtgcctttc
ccccgtctgcatttcttcatgccgggcttcgcccccctcaccagcagggggagtcagcaa
taccgagctcttacggttcctgagctcacacagcagatgttcgatgccaagaacatgatg
gctgcttgtgacccccgccacggtcgctatctcaccgtggccgccattttccgaggccgc
atgtctatgaaggaagtggatgagcaaatgctgaatgtccagaacaagaacagcagctat
ttcgtggagtggatccccaataatgtcaagaccgccgtgtgcgacatcccgcctcgcggt
ctcaaaatggcagccactttcatcggcaacagcaccgccatccaggagttgttcaagcgc
atctctgagcagttcactgctatgttcaggcgcaaggccttcttgcattggtacacgggt
gaggggatggatgagatggagttcacggaagccgagagcaacatgaatgacttggtgtca
gagtaccagcagtaccaagatgccactgctgaagaggagggagagttcgaggaagaggga
gaggaggagcttgcataa
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