Squalius cephalus (European chub): 307159293
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Entry
307159293 CDS
T11930
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform 1
KO
K17908
autophagy-related protein 18
Organism
scep Squalius cephalus (European chub)
Pathway
scep04136
Autophagy - other
scep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
307159293 (wipi2)
04136 Autophagy - other
307159293 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307159293 (wipi2)
03029 Mitochondrial biogenesis [BR:
scep03029
]
307159293 (wipi2)
Membrane trafficking [BR:
scep04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
307159293 (wipi2)
Mitochondrial biogenesis [BR:
scep03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
307159293 (wipi2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
BCAS3_WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_Vps41
DUF7165
Dimeth_Pyl
Motif
Other DBs
NCBI-GeneID:
307159293
NCBI-ProteinID:
XP_079728693
LinkDB
All DBs
Position
1:33490387..33500291
Genome browser
AA seq
427 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFCIPEGQKIFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKSVPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQ
GRAFATVRLPFSGHKNICALAIIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLD
GSVEPANEILEQTAHDRPLVAQTYSAAVAKGYTEDQGAVGGAGVEDDMNTLHLDEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aaccaggataacacatccctagctgttggtaccaagtctgggtacaagtttttctccttg
tcatcagtagacaaattggaacagatctatgaatgtaccgacacagaagatgtgtgcatc
gtggagagattgttctccagcagccttgtcgctattgtcagccttaaggcacctaggaag
ctgaaggtctgtcatttcaagaaagggacggagatatgcaactacagctactcaaacact
atactggctgtgaaactaaacagacagagattgatagtgtgtttagaggagtcactctat
atccacaacattagggatatgaaagtactacataccattcgagagacccctccgaatcct
tctggactatgtgccctgtcaatcagtaatgacaactgctacttggcctatccgggaagt
gcaacaattggggaggtacaagtttttgatacggtcaacctgagggcagctaacatgata
cctgcccatgatagcccactagcagcactagcgtttgatgcaagcgggactaaattggcc
acagcctctgagaagggcaccgtgatccgtgtgttctgcattccagagggccaaaagatc
tttgagttcaggaggggagtaaagagatgtgtgagcatctgttccctcgccttcagtatg
gagggactctatctgtctgcctcaagcaacacagagacggttcatatttttaagctggag
acccagagagagaagtcagtgcctcaggaggagcccactacttggacgggatactttggg
aaagtattgatggcctccacaacatacctgcctgcacacgtaacagagatgttcactcaa
gggagggcatttgctacagtcagactgcccttttcaggtcacaagaacatctgcgctctg
gccataatccagaagattccacgcctgctggtggctgcagcagatggctatctttacctg
tacaatctggacccacaggagggaggagagtgcacactaatgaaacagcataagttagat
ggaagtgtagagccagcgaatgaaattcttgaacagactgctcacgaccggccactcgtg
gcacagacctacagtgctgctgttgccaaaggttacactgaggatcagggggcagttggg
ggtgctggagtggaggacgacatgaacaccctgcacctggacgaagagaacgagcagcct
ccattaatcctggaaacagactga
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