KEGG   Squalius cephalus (European chub): 307159398
Entry
307159398         CDS       T11930                                 
Symbol
unga
Name
(RefSeq) uracil-DNA glycosylase isoform 2
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
scep  Squalius cephalus (European chub)
Pathway
scep03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:scep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    307159398 (unga)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scep03400]
    307159398 (unga)
Enzymes [BR:scep01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     307159398 (unga)
DNA repair and recombination proteins [BR:scep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     307159398 (unga)
 Prokaryotic type
     307159398 (unga)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 307159398
NCBI-ProteinID: XP_079728870
LinkDB
Position
5:5679163..5689085
AA seq 301 aa
MFSSIACLRFLNVQMLGRAAKRSWNSTKYIKISPQGKKQKLEGEDFTSSSSSLSPEQLER
INKNKKAALERLSALQTAPDGFGESWRKALSAEFGKNYFKSLMSFVAEERKKHTIYPPSN
EVFSWTRTCDIQDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLVNIFKELASDIEG
FEQPGHGDLTGWATQGVLLLNAVLTVRAHQANSHKDKGWEIFTDAVVHWLSTNMQGLVFI
LWGSYAQKKGAAINKNRHHVLQAVHPSPLSAHRGFFGCKHFSKANELLKKSGKKSIDWSA
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgttttcaagtatagcttgtcttcgttttttaaatgtacaaatgctcggtcgtgctgcc
aaacgatcttggaattcaaccaaatacattaaaatatcgcctcaggggaaaaagcaaaag
ttggagggcgaagacttcaccagctcatcttcatcactgagtcctgagcaacttgaacgg
atcaacaaaaacaaaaaggcggctctggaaaggctctctgctctccaaactgctcctgac
gggtttggagagagctggaggaaagctctcagtgcagaattcgggaagaactactttaag
tcattgatgtcttttgttgctgaggagaggaaaaaacacaccatctatcctccctcaaat
gaagttttctcctggacacggacatgtgacatacaagatgtaaaggttgtgatactgggc
caggacccttatcatgggccgaaccaggctcacgggctttgcttcagcgttcagagacct
gtgccacctccaccaagcttggtgaacatattcaaagaactggcttcagacatcgaaggc
tttgagcaacccggccatggagatcttacaggatgggcaacacaaggagttctgctgctg
aatgctgtgctaactgtgcgcgcgcaccaggccaactcgcacaaagacaagggctgggag
attttcacagatgcggtggtacactggctcagcactaacatgcagggtcttgtttttatt
ctctggggctcttatgctcagaagaaaggggctgcgattaacaagaatcgacaccatgtt
ctgcaagccgtccatccctcgccactgtctgctcaccgtggcttctttggatgtaaacat
ttctcaaaggccaatgaactgctgaagaagtcaggaaagaagtccatcgactggagcgct
ctgtga

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