KEGG   Squalius cephalus (European chub): 307159582
Entry
307159582         CDS       T11930                                 
Symbol
tubb4bl
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
scep  Squalius cephalus (European chub)
Pathway
scep04145  Phagocytosis
scep04517  IgSF CAM signaling
scep04540  Gap junction
scep04814  Motor proteins
scep05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    307159582 (tubb4bl)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    307159582 (tubb4bl)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    307159582 (tubb4bl)
  09142 Cell motility
   04814 Motor proteins
    307159582 (tubb4bl)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    307159582 (tubb4bl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scep03036]
    307159582 (tubb4bl)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scep04812]
    307159582 (tubb4bl)
   04147 Exosome [BR:scep04147]
    307159582 (tubb4bl)
Chromosome and associated proteins [BR:scep03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     307159582 (tubb4bl)
Cytoskeleton proteins [BR:scep04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    307159582 (tubb4bl)
Exosome [BR:scep04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   307159582 (tubb4bl)
  Exosomal proteins of colorectal cancer cells
   307159582 (tubb4bl)
  Exosomal proteins of bladder cancer cells
   307159582 (tubb4bl)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 307159582
NCBI-ProteinID: XP_079729175
LinkDB
Position
1:complement(50935774..50942577)
AA seq 444 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEASGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLSVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEGEFEEEGEEEVA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgcgcgagattgtgcacctgcaagccggccagtgcggcaaccagatcggagccaagttc
tgggaggttatcagcgatgagcacggcattgatcctactggaacatatcatggagacagt
gacctgcagcttgacaggatcagtgtttactacaatgaggcctcaggtgggaagtatgtt
ccccgtgctatcttggtggacctggagcctggcacgatggattcagttcgttctggaccc
tttggacagatatttagacctgacaactttgtgtttggtcagagtggtgctggaaacaac
tgggccaaaggtcactacacagaaggagcagagctggtggactctgtactggatgttgtt
cgtaaggaagcagaaagctgcgactgcctgcaaggcttccagctcactcactctctcggc
ggaggcaccggctccggcatgggaaccctcctcatcagcaagatccgcgaggagtatccc
gaccgcatcatgaacacattcagcgtggtgccctcgcccaaggtgtccgacaccgtggtg
gagccctacaacgccacgctgtccgtccaccagctggtggagaacactgacgagacctac
tgcatcgacaacgaggctctttatgacatctgcttccgcacgctcaagctcaccacaccg
acctacggcgacctcaaccatctcgtctccgccaccatgagcggcgtgacaacctgcctc
cgcttccccggccagctcaacgccgaccttcgcaaactggctgtcaacatggtgcccttc
ccacgtctccacttcttcatgcccggcttcgctccactcaccagccgaggcagccagcag
taccgctcgctctcagttcccgagctcacgcagcagatgtttgatgccaagaacatgatg
gccgcctgcgacccgcgtcacggccgctacctgaccgtggctgccgtcttccgcggacgt
atgtccatgaaggaggtggacgagcagatgctgaacgtccaaaacaagaacagcagctac
ttcgtcgagtggattcccaacaatgtcaagaccgccgtttgcgacatcccaccacgcggg
ctcaaaatggcagccactttcatcggcaacagcacggccatccaggagctcttcaagcgc
atttccgagcagttcaccgctatgttccgccgcaaagctttcttgcactggtacaccggc
gagggcatggacgagatggagttcaccgaggcagagagcaatatgaacgacctggtgtct
gagtaccagcagtaccaggatgccaccgccgaagagggcgagttcgaagaggagggcgag
gaggaggtcgcctaa

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