Squalius cephalus (European chub): 307159817
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Entry
307159817 CDS
T11930
Symbol
fgd4a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4a isoform 1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scep04990
]
307159817 (fgd4a)
Domain-containing proteins not elsewhere classified [BR:
scep04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
307159817 (fgd4a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
FYVE_2
RHG20_PH
PH_alsin
Motif
Other DBs
NCBI-GeneID:
307159817
NCBI-ProteinID:
XP_079729579
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All DBs
Position
6:complement(14373431..14427981)
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AA seq
866 aa
AA seq
DB search
MLERTKENMSELRRNAIRRKSKPKKTGGSAEECPESSDKAGNPRCFPSKQSDEEEPCVGV
KIAQNKAVGSSSPDEQGRPNEKLNRGCRFSNKSQTGVNGRVSDKRPTLHPKPQVPPKPAH
LQSPLTEVSFPLAAGTLLIIPSMEGGGVEGGVGKGRVSNLISRFEVNSHTDSRREGAPLK
QVSRSPNSSPPHKNYQRQTEQPTDSSSGANSPRHALKPPNGVLTQMNRERDMDGVTHDTV
PVVRIETQALLNGDATNMAERAVMDEDCVDLSHARIDQAEEPERKAPEQQDVVMNSIPEQ
KETNEQKLYKIANELLQTEKAYVTRLNLLDKVFYAKLIEEARKDTFPVDVVMKIFSNISS
INAFHSQFLLPDLEKRMGEWTSTPRIGDILQKLTPFLKMYAEYVRNFDHAMDLVKQWTER
SPPFKAIILEIQSQEVCGSLTLQNHMLEPVQRVPRYEMLLKDYLKKLPQDHIDRRDAEKS
LEIISMAATHSNTAIKKTENLKKLLEIYEMLGEEEDIVNPSNELIKEGHILKLAARNTSA
MDRYLFLFNNMLLYCVPKFSLVGQKFTVRTRIGIEGMKVMETFNEDYPHTFQVSGKERTL
ELQASSEQDKKSWIKAFQETIHISLQKNETFKSACKDVEETSELKISELGKRAPRWIRDN
EVTMCMKCKEAFYALTRRRHHCRACGYVVCSKCSDYKAPLEYDGNKMNKVCKDCYCILTG
HIESEEREGKKKGILEIEAAQFSGSSIMCGFLQYCEKNKPWQKVWCVIPQKEALVLYLYG
APQDVKAQSTIPLLGYQVEDSPRPTDPPTSFRLSQSKSVHSFVAESEELKQRWLKVIRMA
VTGEEPESPEESHSTEITQEPSSNGV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacgaactaaagaaaacatgagtgaattgaggagaaacgctatcaggaggaag
tctaagccgaagaagacaggagggtcggcggaggaatgcccggaatcctcagataaagct
ggcaacccccgctgctttccctccaaacaatctgatgaagaggaaccttgtgttggggtg
aaaatcgctcagaacaaagctgttggcagcagcagtcctgatgagcaaggtcgtccaaat
gaaaagttgaatcgtggatgcagattcagcaataagagccaaactggagtaaatggaaga
gtttcagacaaacggccaacactgcatcccaaaccacaagttcctcctaagccagcacac
cttcagagtcctttgacggaagtctcctttcctctggctgctggaacgttactcatcata
cccagcatggaggggggaggagtagaaggaggagtagggaagggccgggtgtccaacctc
atcagtcgctttgaggtgaacagtcacacagacagtcggagggagggcgctccactgaag
caggtcagcagatctcctaactccagcccgcctcataagaactaccagagacagacggag
cagcccacagactccagctccggcgcgaacagcccacgtcatgctctcaaaccccccaat
ggggttctaacacaaatgaacagagagcgggacatggatggagttacgcacgacacagtt
ccggtcgtgaggatagaaacgcaggcactgctgaatggagatgccaccaatatggctgag
agggcagtaatggacgaggactgtgtagatctgtctcatgctcgcattgaccaggccgaa
gagccggaaaggaaagcacctgagcagcaggacgtggtgatgaacagcatccctgagcag
aaggaaaccaatgagcagaagctctacaagatagcaaatgaacttctgcagacagagaag
gcctatgttacacgacttaacttattagataaggtgttttatgccaagctgatagaagag
gcaagaaaagacacattccccgtggatgtggtgatgaaaatcttttccaacatctcttcc
attaatgccttccacagccagttccttctgcctgacctggaaaaacgcatgggagaatgg
acgtcaacacctcgcattggggacatcctacagaagctcactcccttcctgaagatgtac
gctgagtatgtgaggaactttgaccatgccatggatctggtgaagcaatggacagagcga
tcacctccatttaaagctatcattctggagatccagtctcaagaagtgtgtggcagtctg
acgctgcagaatcacatgttggagcctgttcagagagtgccacgatacgagatgctgctc
aaagactatctgaagaaacttccacaggatcacatagaccggcgggatgctgaaaagtct
ttagagattatttccatggctgccacgcattccaacactgccattaagaaaacagaaaac
cttaagaaattgttagaaatttatgagatgttgggagaagaagaggacatcgtgaacccc
tcgaatgagttaataaaggagggtcatattctgaaactggcggccagaaatacttcagcc
atggacagatatctcttcctgttcaacaacatgcttctgtactgcgttcccaagttcagc
ttggtgggacagaagtttacagtgcgcacacgtattggcattgaaggtatgaaggtgatg
gagacgttcaatgaggattatcctcacacctttcaggtttccggaaaggaacgtacactg
gagctgcaggccagctctgaacaggataaaaaaagctggataaaggcattccaggaaacg
atacacatctccctccagaaaaatgagacctttaagtcagcatgcaaagatgtggaggaa
acatcggaacttaagatatcggagctgggtaaaagagcccctcgttggatccgagacaac
gaggtgaccatgtgcatgaagtgcaaagaggccttttatgctctcacacgcaggagacat
cactgtcgggcctgtggatacgtggtctgctcgaagtgctcagactacaaagcccctctg
gaatatgatgggaataagatgaacaaggtgtgcaaagactgttactgcatcctgacaggc
catatagagagtgaggagagggagggcaagaagaagggaattctagagattgaagctgct
cagttctcaggaagcagtatcatgtgtggcttcctacagtactgtgagaagaacaagccc
tggcagaaagtctggtgtgtcattcctcagaaagaagctttagttctctacttgtacgga
gcacctcaggatgtcaaggcccagtccacaattcctctgcttggctaccaggtggaggac
agcccgagacccaccgaccctcccacaagcttcagactatctcagtctaaatccgtccac
agctttgtcgcagaaagcgaggaactgaaacagcgctggctcaaagtgatccgtatggcg
gtgacaggagaggaaccagaatcgcctgaagaaagccattctacggaaatcacccaagaa
ccaagctctaacggtgtctga
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