Squalius cephalus (European chub): 307160324
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Entry
307160324 CDS
T11930
Symbol
sptbn4b
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
scep Squalius cephalus (European chub)
Pathway
scep04517
IgSF CAM signaling
scep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307160324 (sptbn4b)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
307160324 (sptbn4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scep04812
]
307160324 (sptbn4b)
Cytoskeleton proteins [BR:
scep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
307160324 (sptbn4b)
Intermediate filaments
Intermediate filament-binding proteins
307160324 (sptbn4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
Helical_needle
TMP_3
Motif
Other DBs
NCBI-GeneID:
307160324
NCBI-ProteinID:
XP_079730445
LinkDB
All DBs
Position
6:complement(44066482..44154887)
Genome browser
AA seq
2616 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNRPASTGFWETETTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLSRVSCRISDLYNDLRDGYMLIRLLEVLSGEMLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAIEAE
KIIRRYEALASDLLEWIERTISIISNQKFANSLSGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWEILEKAEHDRGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADILSYEERISVV
VELATEMESEGYYDIRRISARKENILGQWILLKELVVGRKSRLEKNLALQKTFQEMVYMI
DWMEEMQIKLLSKDYGKHLLEVEDMLQKQSLQEADISIQADRVQTLNIAALKFTTVEGYQ
PCDPQVICNRVNHVNTCLEELKQLAAKRRLELEDSRELWAFFQEVEESEAWIREKTSILA
TQSCGKDLSSVLRLLQKHKTLAGELLARRTLLQQTMMKGKEILTQKSFGTAGIQERLMEA
KAEWKRLEDQATQRLCNLQEALDFFQFSTETDDLLAWLQDTYRLVSSEDFGHDEYSTQSL
LKKHRGVRESIDKHRVQVVGLRKHMVALPLYYRELDEVRARMSETEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACEVWIDEKEQWLNNMEVPERLEDVEVIAHRFESLDQEMNSLM
GRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVELVEQKKDHLDSILRIQNYLL
ECTEIKSQIQDKRKAIDATQYVGSDLGSVLALQRRLSTMEGALAVLEPKLLHLQEDAEEL
ATSHPDKAVEILVPFEGISVEWEELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWLVQTQ
TSAASDELPNVLEDAERLINQHAALKEEIGRYEEDYERLQSVNELLESEEAPLPHGALQQ
WLHKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERVDLLSNRGNQNRE
HAQQWLHKLNDQWELQRFLQDCHEIGDWVAEKMLMARDTSRDETQKLHKKWLKHQTFMAE
LAQNKEWLDKIEKEGQRLMQEKPELSALVKKKLEEIRECWQDLESTTQAKARQLFEANRA
DLLVQSYTSLDQRLQQLEGQLAHVDYGQDLTTVNKQLKKLQTMECHMEEWYKEVGDLQVH
AASIPQQGEVMEKVSEKQVGVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILWIQ
EHLPMATSQEHGTSLQAVQQLMKKNQSLQKELHGHRARVEDVLERAGVIASIRSPEADSI
RDGMEQLHHLWEVLWVETERRQLMLDAMYQAQQYYFDVGEVETWLSEQELHMMNEETGKD
EASTLQLLKKQLALEQTIEDYAETIGLLSQQCRQLLELGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLFQLNREVDELEQWIAEREVIASSTELGQDFEHVTILQEKFTEF
AAETGSLGHERVTAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRGQMLAA
SHQLHKFFSDSREVLAQIEDKQRRLPEVRACQGGTSNTSTLQRLMQTFEHDIQLLVAQVR
QLQESAAQLRTVYAGEKAEAIAMQEHEVMQTWKELLISCEDCRMQITTATDKLRFFGMVR
DQLMWMESIICQIGTGEKPSSFLRALMGYGLSGACRDVSSVEVLMNYHQSLKSEVEARNK
SVLQCIEMGKTLLAARNPASEEIKEKLEKVLDKQHELTEKWDKHWEELQQMLEVHQFAQE
AVVAEAWLTAQEPLLSSNELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKI
KAEQSQLPPTPLLGRKVFLDPQDSSPARSSPSSIIRQTIYEQGDARLERITPQPSPSSVA
RRLGSTVANYTPIMNGAATFRLQEARNAGIVGVAAGLGTAMEHKVTQLRAEFKAQIPQQK
IEHIHEVVHPLLERERERYHENVMAEVVLQEPGGGRERLNSVVGGSGSSRSELVVEQHPP
PRESRLERQLSTEQLIQARRDELPQEVWRERAERAERRLERQTSSEQEGHEVRRRERHRL
ERQESSEHEAKEQSDKRSGGGEKRTTLAEIVEQLQEREAAQARGEIPRLPNGVPEKSSRP
DRPRARDRPKPRRRPRPKETTAGETRRSRSAPAQSSPAVPLPPTHTAQHEGFLFRKIDID
GQKKSSNSRSWVNLYCVLNKGELGFYKDAKNTATPYNNEPLINLSRCACDINNGYKKKKN
VFTLKTKDGSEFLFHAKDEDDLKIWITSITASISEHEEINKQGQTNPTTSSTDEGTRREG
SRAGGSERGEKSDRADVGSVRSDKGEKPEKKTGKKK
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctcaacagacctggacaatgctgaggcccagagacagctcaacaacaac
aacaggcctgcaagcacaggattctgggaaaccgagaccaccagtgccaaactatttgag
tgctcccgcatcaaagcactagcagatgagagggacgcggtacagaagaagacctttact
aagtgggtgaactctcacttgtcccgtgtgtcctgtcgtatctctgacttgtataatgac
ctgagagacggctacatgctcatcagactgctggaggtgctgtcaggagagatgctgcct
cggcccacgagaggcaggatgaggattcactgtttggagaatgtggacaaggctcttcag
ttcctcaaagagcagagggttcatctagaaaatgttggttctcatgatatagttgatgga
aaccaccgcctcactctcggcctcatctggaccatcatccttcgcttccagattcaggtg
attaagattgagaccgaggacaacagagagacacgctcagctaaagatgccctacttttg
tggtgtcagatgaaaacagcaggataccctgaggtcaacattcacaacttcaccacctgc
tggagggatggcctggctttcaacgctcttattcacaggcacaggcctgatttaattgaa
ttccacaagttgaccagatcaaatgcaacacacaacctccagcaagcctttaacatagct
gaacagagtctcggactcaccaaactactagaccctgaggatgtaaacacagagaatcca
gatgagaagtccatcatcacttatgtagtatcctactatcattacttctccaaaatgaag
gcacttatcgtagaagggaagagaataggaaaggtgctggacaatgctatagaagctgag
aagataattcggcgctacgaggctttagcgtccgacctgttagagtggattgagagaacc
ataagcatcattagcaatcagaagtttgcaaactcgctatcgggtgttcagcaacagctt
caagcctttaccacctactgcaccattgagaagcctatcaaattccaggagaaagggaac
ctggaggtgctgcttttcaccatccaaagtaagctcagagctaacaatcagaagccatat
gtgcctcatgacgggaaactaatctcagacatcaataaggcgtgggagatactggagaag
gcggagcacgacaggggcgtggctcttagaaaagagctgattcgtcaggaaaagctagaa
cttcttgctcaacggttcgatcataagaccaccatgaggcaggcttggctgaatgaaaac
cagcgtctcgtctcacaggataactttggctatgacctgccagcggtagaagctgccatg
aagaaacacgaggcgatcgaagcagacatcttgtcatacgaggagcgcatcagtgtcgtg
gtggagctggcgacggagatggagtctgagggatactatgacatccgtcgcatctcggca
cgcaaagaaaacatcctcggccagtggatccttctgaaggagctggtggtgggacgtaaa
tcccgtctggagaagaacctcgccctgcagaagaccttccaagagatggtctacatgatc
gattggatggaggagatgcaaattaagctgctgtctaaggactacggtaaacatctcctt
gaggtggaggacatgctccagaaacaaagtttacaggaggctgacatctctatacaggca
gacagagttcaaacccttaacattgcagctctcaaattcactactgttgaaggttaccag
ccgtgtgaccctcaggtcatctgtaaccgcgtgaaccacgtcaacacctgcctagaagaa
ttaaagcagctggctgcgaagcggcgcttggagctggaggattcacgcgagctgtgggcc
tttttccaggaggtggaggaatcggaggcttggatccgggagaaaacatccatcttggcc
acgcagagctgcggaaaagacctgagcagcgtcctgcgacttctgcagaagcacaaaact
ttagctggagagctgttggcgcggcgcacgctacttcagcagaccatgatgaagggcaag
gagatcctcacccagaagagcttcggcacagcaggaatacaagagagactaatggaggcc
aaggccgagtggaagagactggaggaccaggccacacagaggctgtgtaacctacaagag
gcactggacttttttcagtttagcacagagacggatgatctactagcttggctacaggac
acttaccggctcgtttctagcgaggacttcggacacgatgagtactctacgcagtctctt
cttaaaaagcacaggggtgtccgagagagtattgacaaacaccgtgtgcaagtggtgggg
cttcggaaacacatggttgcgctgccgttgtattatcgggagctggatgaagtgcgagcg
cggatgtcagagacggagcagctctacacagaggtggcggaagttgccgtgttgcgtcag
cagtggctccacgacgcgctggctgtgtatcgcatgttcagtgaggtgaacgcctgtgag
gtgtggatcgatgagaaagagcagtggctgaacaacatggaggttcccgagagactagag
gacgtggaggtgatcgcacacaggtttgagagcttggaccaggagatgaacagcctgatg
ggaaggatactagatgttaatcagatcgtccagcagcttttagacagcggtcaccccagc
tccactgaagtcaggggctgtcaagatcatttaaacagcaggtggaaccgcatcgtcgag
ctggtcgagcagaagaaagatcacctggactcgatcctgcgcatccagaactacttgctg
gaatgtacggaaatcaagtcccagattcaggacaaacggaaagccatagatgccacgcag
tatgtgggcagtgacctgggcagcgtcctggccctgcagaggcggctctccaccatggag
ggagctctggccgttctcgagcctaagctccttcaccttcaggaggacgcggaggagctc
gccacatcacatcccgacaaggccgtggaaatcctggttcccttcgagggcatcagcgtg
gagtgggaggaactaaagcgcacattgcaaggctgtgaggactctttaaccgtcgctggt
cgattgcagcagttcatccaagacttggattcttttctcacctggctggttcagactcag
acatctgctgcttctgatgagcttcccaatgttttagaggacgcggagcggctgataaac
cagcacgccgcgctgaaggaggagatcggaaggtatgaagaggattacgagcgcctccag
tctgtgaatgagctcttggagtccgaggaagcgccgctgcctcatggagctctgcagcag
tggctccacaagctggacgtgggctggaataaacttctggagatgtgggagagcaggagg
gaggtgctggtgcaagctcacatcttccatctcttcctgagggacgtcaagcaggcggag
gctttcctcaataaccaggagtcagcgttggcccatgtggagcttcccaccacagtggag
accgtggaggcagccatcaaaaagcacaaggactttaccaccaccatggagctcaacctg
caccgcattaaagctgtcatagaggcgggagagagcctcatcagtcagaacaacatctac
tcagagcgcattagagagagagtggatctgctctctaacagagggaaccagaaccgtgaa
cacgctcagcagtggcttcataaactcaatgaccagtgggagctccagaggtttctgcaa
gactgccatgagattggtgattgggtggcagagaagatgctaatggctcgcgacacttcc
cgcgacgagactcagaagcttcataagaagtggctgaaacatcagaccttcatggcagaa
cttgctcagaacaaggagtggctggacaagatcgagaaagagggccagcggttaatgcag
gagaagccggagctgagcgcgctggtgaagaagaaactggaggagatccgtgagtgctgg
caggatctggagagcaccacacaagccaaagcccggcagctgttcgaggccaaccgggcc
gacctgctggtgcagagctacaccagcctggaccagcgactccagcagctcgagggacag
ctggcacacgtggactacggccaggacctcaccacggtcaacaagcagctgaagaaactg
cagacaatggagtgtcatatggaggagtggtataaagaggttggagacctgcaggtccat
gcggcttccatccctcagcagggggaggtgatggaaaaggtgtccgagaagcaagtcggt
gtggaaacgcgaatcgttcgactgattgagcctctgaaagagagacgccgtatcctgctg
gcctctaaagaagtgcaccaagttggccgtgaccttgaggatgaaattttgtggatacaa
gagcatcttccaatggccacttctcaggaacatgggacaagtttacaagcggtacagcaa
ctcatgaagaagaatcaaagtctgcagaaagagcttcatggtcaccgtgcgcgtgtggag
gacgttctggagcgggcaggcgtgatcgcgtccatccgcagtcccgaggcagacagcatc
agggacggcatggagcagctccatcacctgtgggaggtgctgtgggtggagacggagcgc
cggcagctcatgctggatgccatgtaccaggcgcagcagtactactttgatgtgggagaa
gtggaaacctggctcagcgagcaggaactgcacatgatgaacgaggagacgggaaaggat
gaagccagcactctccagttgctgaagaaacagctggcgctggagcagaccatagaggac
tatgctgagaccatcggcctgctgtctcagcagtgtagacagcttctggagctcggacat
ccggactgtgagcagatcagtaagcgtcagtctcagatcgacaggctgtacgtgtctctg
aaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctttcagctc
aacagagaggtggatgagctcgagcagtggatcgcagagagggaggtcatcgccagctcc
actgaactcggacaggactttgagcacgtcacgattctgcaggagaaatttacagagttt
gcagcggagacagggagcctggggcacgagagggtcacagccgttaaccagatggttgat
gagctcatagattacggccacgcggacgcagccaccatcgctgaatggaaggatggcgtg
aacgaggcctgggcggatctgctggagctgatggagacgcggggacagatgctcgctgcc
tcacaccagttacacaagttcttctctgactctcgagaggtgttagcacagattgaggat
aagcagcggaggttacctgaggtccgcgcatgtcaaggaggcacttcaaataccagcact
ctacagagactcatgcagactttcgaacatgatattcagctgcttgttgcacaggtaaga
cagttacaggagagtgcagcccagctccgaacagtttatgccggcgagaaagcagaagcc
atcgccatgcaggaacacgaagtgatgcagacatggaaagagctgctcatatcctgcgag
gactgccgaatgcagatcaccacagcaacagacaagttacgtttctttgggatggtgcgt
gatcagctgatgtggatggagagcatcatctgtcagataggaactggggagaaaccaagc
tctttcctcagagctttaatgggatatgggctctctggtgcttgcagggatgtgtcatcc
gtggaggtcctgatgaactatcaccagagcctcaagagtgaggtggaggcccgcaacaag
agtgtcctacagtgtatcgagatgggcaagactctactggccgcccggaaccctgcgtca
gaagagattaaagaaaagctggagaaggttttggacaagcagcacgaactgactgagaaa
tgggacaaacactgggaagagttgcagcaaatgttggaggtgcatcagtttgctcaggaa
gcagtggtagcagaggcctggctcactgctcaggaacccttgctaagtagtaatgagcta
ggcggcagtgtggatgaggttgagcagctgattcgcagacacgaagccttccgcaaagct
gctgccacatgggaagagcgcttcagctctttacgtcgtcttaccacggtagagaagata
aaggcagagcagagtcagcttcccccaactcctttgttgggacggaaagttttcttggac
cctcaggactcttctcctgcgcgcagtagcccttcctccatcataagacagaccatttat
gagcagggtgacgcccggttggagcgcatcactcctcagccctctccctcttctgtggct
cgcagacttggctctactgtggccaactatactcccatcatgaatggagctgctactttt
cgccttcaagaagccaggaatgctgggattgttggcgtggcagcaggactgggcactgct
atggagcataaggtcacccaattgcgagctgaattcaaggctcaaattccacagcagaag
atcgagcacatccatgaggtggtccaccccctactggagagagagagggagcggtatcat
gagaacgtgatggcagaggtggtgcttcaggagccaggcggaggacgggagcggctgaac
agcgtggtgggagggagcgggagcagtcgctcagagctggtggtggagcagcatccccca
ccgagggagtcgcgtttggagagacaactgtctaccgagcagctgattcaagcacggagg
gacgagctgcctcaggaggtgtggagggaacgagctgagagggcagagaggaggctggag
agacagacatctagtgaacaggagggtcatgaggtgcggcgtagggagcgacatcggctg
gaaagacaggagagcagtgagcacgaggccaaggagcagtcagacaagcgctctggaggc
ggggagaaaaggaccacgctagctgagattgtggagcagcttcaggaaagggaggcagca
caggcccgaggagagattccacgtctacccaatggtgttcctgagaagtcttctcgaccg
gacaggccacgggctcgcgacagacccaaaccgagaagaagaccacgacccaaggagaca
acagctggcgaaacgcgacgctcgaggtctgcgccagcccagagcagcccagcagtaccc
ctgccacccacccacacggcccagcacgaagggttcctcttccgaaaaatagacattgat
ggccaaaagaagagttcaaacagcagatcttgggtgaacctgtactgcgtgctgaataaa
ggtgagctgggcttctataaggacgcgaagaacaccgccacaccttacaacaacgagccg
cttatcaacctgagccgttgtgcctgtgatatcaacaatggttacaaaaagaagaagaat
gtcttcacgctcaaaactaaggatggaagtgagtttctgttccatgctaaagatgaggac
gatctgaaaatctggatcacaagtataaccgccagtataagtgagcatgaagagattaac
aaacaggggcagaccaatccaactacctcatctactgacgagggaacgcgcagggagggc
agcagggcaggcggttcggaaagaggcgaaaagtccgaccgagccgacgtgggatcggtg
cgttcagacaagggtgaaaagcctgagaaaaagacaggcaagaagaaatga
DBGET
integrated database retrieval system
