Squalius cephalus (European chub): 307160572
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Entry
307160572 CDS
T11930
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform 1
KO
K10357
myosin V
Organism
scep Squalius cephalus (European chub)
Pathway
scep04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
307160572 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307160572 (myo5aa)
04131 Membrane trafficking [BR:
scep04131
]
307160572 (myo5aa)
03029 Mitochondrial biogenesis [BR:
scep03029
]
307160572 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scep04812
]
307160572 (myo5aa)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
307160572 (myo5aa)
mRNA cycle factors
P-body specific factors
307160572 (myo5aa)
Membrane trafficking [BR:
scep04131
]
Others
Actin-binding proteins
Myosins
307160572 (myo5aa)
Mitochondrial biogenesis [BR:
scep03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
307160572 (myo5aa)
Cytoskeleton proteins [BR:
scep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
307160572 (myo5aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
nSTAND3
MC7
Npun_R1517
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
307160572
NCBI-ProteinID:
XP_079730857
LinkDB
All DBs
Position
6:38359137..38450946
Genome browser
AA seq
1890 aa
AA seq
DB search
MAASELYTKYARVWIPDVEEVWRSAELTKDYRQGDGVLQLLLEDGKELEYKLDPKTNNLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTDSKLIYTYCGIVLVAINPYETLPIYG
SDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYHIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASAHLPEFKVLKLGKADNFHYTKQGRNPVIDGID
DAKEMSTTKNAFTLLGVNESYQMGLFRILASILHLGNVEVKDRDSDSSIIPPNNGHLSVF
CELMGVTYQDMSHWLCHKKLKTATETYIKPVPKLQAINSRDALAKHIYAKLFNWIVDHVN
KSLHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLKTCALFEK
PRMSNKAFIIQHFADKVEYQCDGFLEKNKDTVNEEQIHVLKASKFDLLVELFHDEEKATS
PTGAAPTTGGRTRLSVKPVKSKTGQASKEHKKTVGLQFRNSLHLLMETLNATTPHYVRCI
KPNDYKFAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMVQKDVLT
DRKMTCKNVLEKLVQDPDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWL
ARKKYLRMKHAATTIQRYVRGHQARCLAKFMRRTRAAIIIQKYQRMYVQRTCYKRKQAAA
LAMQCILRAYMARQLYKALLREHKAIIIQKMVRGWLARQWFKRSLRAIVYLQCCIRRMRA
KRELKKLKIEARSVEHFKKLNIGMENKIMQLQRRIDEQNKDNRSLSERLNGLEISHAAES
ERMRVEVHRLRGAEEDAKNNANKVTTLLEELERLRKDLKNTQKEKKAIEDWAKTYQDEME
QMISELKEQNHLLKNEKNDLNRMIQEQGQQWTEKMQRALKEETQQLENDLNEERSRYQNL
LTEHLRLEEKYDDLKEEITLSVNVPKPGHRRTDSTHSSNESECTYNSEFAESEEGSRGGE
DVSKGILDMSLFLKLQKRVSELEQEKQSLQNELDRREEQFQRARARDDEEHKKARGAELE
YESLKRQELESENKKLKHHLNEMRQSLRGSAEAGSAAPGSPPYTVLLDQLNSSNEELEVR
KEEVLILRSQLVSQKEAMQHKATMTEPLPYIEDVQKLTDAKEISQAYMGLKDTNRSPRFT
RRPTEVNELVSRLRSPFPDYHKLNEDGELWLVYEGLKETNRLLESQLQAQRRSHDNEVEV
LRGELQSVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLELHSDDPKEYKAY
RISMLRRMVDLMEQLEKQDKTVRKLKKQLKVFAKKINDLEGGQMDVSPGQTTDEPVHPVN
IPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYVND
DQKVRSLLTSVINSIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGDEQFMKHNSPKQ
NDHCLSNFDLAEYRQVLSDLAIQIYQQLIKSMENILQPMIVSGMLEHETIQGVSGVKPTG
LRKRTSSIADEGTYTLDSIIRQLNTFHSIMCQHGTDPELIKQVVKQQFYIIGAVTLNNLL
LRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTCGAKETLEPLIQAAQLLQVKKKTDEDAE
AICSMCNALSTAQIVKVLNLYTPVNAFEERVSVLFIRTIQTRLRDRKESPQLLMDTKVIY
PVTFPFNPSSLALETIQIPGSLNLAFLTRV
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtctgaattatatacaaagtatgcccgggtctggatcccggatgtagaggag
gtgtggaggtcagcagagctcaccaaggactacagacaaggagacggagtactgcaacta
ctgctagaggatggaaaggaattggagtacaaattggaccccaagacgaacaacttgcca
catctgcgtaacccagatatcctggtgggagaaaatgacctgacggctctcagctacctt
cacgagcctgctgtgttacacaacctgaaagtgcgcttcactgattccaaactcatctac
acttactgcggtattgtgttggttgctataaacccatatgagacgcttcccatctatgga
tccgacatcattaatgcgtacagcgggcagaatatgggcgacatggaccctcacatcttc
gcagtggcagaagaggcttacaaacagatggccagggatgagaggaatcagtccatcatt
gtgagtggagaatctggagcagggaaaactgtttcagcaaaatacgccatgcgttacttt
gccacggtcagcggctctgccagtgaagccaacgtagaggagaaagttctggcatccaac
cccatcatggagtccatcggtaacgccaagaccaccaggaatgacaatagcagtcgattt
gggaaatacattgagatcggctttgataagaggtatcacatcatcggtgcgaacatgagg
acatatctattggagaaatcacgcgtcgtatttcaggcggatgaggagaggaattatcat
atcttctatcagctctgtgcatctgctcacctcccggaatttaaagtcctgaaactcggg
aaggctgataattttcactacaccaaacagggcaggaacccagtgatagatggaatagat
gatgccaaggagatgtcgaccacaaagaacgccttcacactgctaggtgtaaatgagtcc
tatcagatgggcttgtttcggattctggcttcgattttgcacctgggcaacgtggaagtg
aaggatagagactcggacagcagtatcattccaccaaataatggtcacctgagtgtgttt
tgtgaactgatgggcgtgacatatcaagacatgtctcattggctgtgtcataagaagctg
aagacggcaactgagacgtacataaagcctgtccccaaactacaggccataaattctcgc
gatgccctcgctaaacatatctacgccaaactcttcaactggatcgtggaccatgtgaac
aaatcactacattctacggtcaagcagcactcgttcatcggagtcctcgacatttacggg
tttgagacttttgaaatcaacagttttgaacagttctgtattaattatgccaatgagaaa
ctacagcaacagttcaacatgcatgtgtttaagttggagcaggaggagtacatgaaagag
cagatcccctggactctcattgatttctatgataatcagccgtgtatcaacctcatcgag
gccaagatgggcgtcctggacctgctggacgaagagtgcaagatgccgaagggttcagat
gactcctgggctcagaaactgtataacactcatttgaagacgtgtgcactttttgaaaag
ccacggatgtccaataaagctttcattattcagcactttgcagataaggtggagtatcag
tgtgatggttttctggagaagaataaagatacagtaaatgaggagcagatacatgttctg
aaggccagtaagtttgacctgctggtggagctgttccatgatgaggagaaagcaacgagt
ccaaccggtgctgctcctaccactggaggacgcactcgcctcagtgtcaaaccagtcaag
agcaaaactggccaagctagcaaagaacacaagaagacagtcggactgcagttccgtaac
tctctgcatctgctgatggagacgctgaatgcgactacgccgcattacgttcgctgcatc
aaacccaacgattacaaatttgccttcacgtttgaccccaagagggcagtgcagcaactg
cgtgcatgtggagttttggaaacaatacgcatctccgcagctggtttcccttctaggtgg
acgtatcaagagttctttagcaggtatcgtgtcctgatggtacaaaaagatgttttgacg
gacaggaagatgacctgtaagaacgttctggagaaacttgtgcaggatccagataagtac
cagtttggcaagaccaagattttcttccgagcggggcaggttgcgtacctggagaaactg
cgtgcagataagttgcgtgctgcctgcatccgcatccagaagaccatccgctgctggctg
gcgcgcaagaagtacctgcgcatgaaacatgctgccacaaccatccagagatacgtccgt
ggacaccaggcccgctgtcttgcaaaattcatgcgtcgcacacgtgctgcaatcatcatt
cagaagtaccagcgcatgtatgtccagagaacatgttacaaacgcaagcaggctgctgct
ctggccatgcagtgcatcctcagggcctacatggccagacaactgtacaaagcgcttctg
cgtgagcacaaggccatcatcattcagaagatggtgcgcggctggttggcgcggcagtgg
ttcaagcgatcgctcagagccatcgtgtacctgcagtgctgcatccgtcgcatgcgagcc
aagagggaactcaaaaaactcaagatcgaggcgcgctcggtcgaacacttcaagaaactc
aacatcggcatggagaacaagatcatgcagttgcagcgcaggatagacgaacagaacaag
gacaaccgttctctcagcgagcgtttgaatggtctagagatcagccatgctgcagagtct
gagcgcatgcgtgtggaagtccaccgtctgcgaggggcagaagaggatgccaaaaacaac
gccaacaaagttacaactcttctggaggagctggagcgactgcgtaaagacctgaagaac
acacagaaagaaaagaaagccatcgaggattgggcgaaaacctaccaggacgagatggaa
cagatgatctcagaactaaaggagcaaaaccacttgctgaagaacgagaaaaacgacctg
aaccgaatgatccaggaacaaggccagcagtggacagagaaaatgcagagggctctgaag
gaggaaacccagcagctagaaaacgatttaaacgaggaacggtctcgctaccagaacctc
cttaccgaacacctccgactagaggagaaatacgacgatttgaaagaggagatcacactt
tcagtgaatgttccaaaacctggtcacaggcgcacagactccacacacagcagcaacgaa
tcagaatgtacctacaactccgaatttgccgagtccgaggaagggtcccgcggaggggag
gatgtttccaaagggatactggacatgtccctgttcctgaagctacagaagagagtatcc
gaactagagcaagaaaaacagtcactgcagaacgaactcgatcggagggaagagcagttt
cagcgggctagagctagggatgatgaggaacataagaaagctcgtggtgctgagctggag
tatgaatctctcaagcgtcaggagttggagtctgagaataagaagctcaaacatcatttg
aatgagatgcgtcagtctttgagaggcagcgctgaggccggttccgctgctccgggttct
cctccgtacactgtcctgctggatcagctgaactcctccaacgaggagctggaggtgcgg
aaggaagaggtgctcatcctgcgctctcaacttgtcagtcagaaagaggccatgcaacac
aaggcaaccatgactgaacctttgccgtacattgaggatgtgcagaagttgaccgatgcc
aaggagatctcccaggcctacatgggtctcaaagacaccaacagatcacccaggtttaca
cgcagaccgactgaagtgaacgagcttgtgagcaggttgagatccccattccctgattac
cataaactgaatgaggatggagagctgtggttggtttatgaagggttaaaggaaacaaac
aggttgttggagtctcagttgcaggctcagcgtcggtctcatgacaatgaggtggaggtt
ttgcgtggagagctgcagagtgttaaagaggaaaataaccgtcagcagcagctgttggct
cagaatctacagcttcctccagaggctcgaatcgaggccagtctacaacacgagatcacg
cgcctcaccaacgagaacctggagcttcactctgatgatccaaaggagtataaagcctac
agaatcagcatgttacgcaggatggttgatctcatggagcagctggagaaacaggataag
accgtccgcaagctgaagaaacagctcaaagtctttgcaaagaagatcaatgacctggaa
ggcgggcagatggatgtgtctccaggacagacgactgatgagcctgttcatccagtgaac
attccacgcagggagaaagatttccagggaatgctggaatacaagaaagaggatgaactc
aaactggtcaaaaatctcatacttgagctgaagcctcgtggtgtggcagtgaatctgata
ccaggtctgccggcatacatcctcttcatgtgtctgcgccatgccgactacgttaatgat
gaccagaaagtccgatctcttctcacctctgtcatcaacagcatcaagaagatcctcaag
aaaagaggtgacgactttgagactgtttccttctggttgtccaacacgtgtcgtttcctg
cactgcttgaaacagtacagtggcgatgagcaattcatgaagcataactcccctaaacag
aacgatcactgtctctccaactttgacctggccgagtaccggcaggttttgagcgatctg
gccattcagatctaccaacagctcatcaagtctatggagaacatcctgcagcccatgatc
gtctctggcatgctggaacatgaaaccatccagggtgtttccggggtgaagcccacgggt
ctccgtaagaggacatcgagtatcgcagacgagggcacgtacacgttggactccatcatc
cgccagctcaataccttccactccatcatgtgtcagcacgggaccgacccggagctcatc
aaacaggtggtcaagcagcagttctacatcatcggagccgttactctcaacaacctgctg
ctgcgtaaagacatgtgctcctggagcaagggcatgcagatcaggtataacgtgagtcag
ctggaggagtggctgagagataagaatctcatgacatgcggcgcaaaagagacgctggag
ccgctgattcaggccgcacaactactgcaggtgaagaagaaaaccgatgaggatgccgag
gcaatctgctccatgtgtaacgccctctctacagcacagatcgtgaaggtgctgaacttg
tatacgcctgtcaatgcatttgaagagcgtgtgtcagtattgttcataagaacaatacag
acgcgtttacgggatcgaaaggagtcgcctcagctgctgatggacaccaaagtcatctac
cccgtgactttcccttttaacccctcctctctggccctggaaaccattcagatccccggc
agcctcaatctggccttcctcactcgcgtgtag
DBGET
integrated database retrieval system
