Squalius cephalus (European chub): 307160784
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Entry
307160784 CDS
T11930
Symbol
onecut1
Name
(RefSeq) hepatocyte nuclear factor 6 isoform 1
KO
K08026
one cut domain, family member 1 (hepatocyte nuclear factor 6)
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307160784 (onecut1)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
307160784 (onecut1)
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Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
307160784
NCBI-ProteinID:
XP_079731115
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All DBs
Position
6:38242319..38247876
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AA seq
456 aa
AA seq
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MNAQLSMENIGDLHGVSHEPADLMTGDSAHHRSHRSSLSAHARSMGMASILDSGDYHHHR
PPEHPGLATHLHPAMSMACEAPPGMSMSSTYTTLTPLQPLPPISTVSDKFPHHHHHHHHH
HHHHPHQRIPGNVSGSFTLMRDDRGLAPMNNLYSPYHKDVASMGQSLSPLSGSGLSGIHN
SQQGLPPYAHPGATMPAEKMLTPNGFEAHHPAMLARHGEQHMSASSASMVPINGIHHHPH
AHLNAQGHGQVLGSTREHNHSSAPGSQLNNGSNSGQMEEVNTKEVAQRITTELKRYSIPQ
AIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAGERT
IACKRKEQDHGKGERGSLSKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLEL
ATVSNFFMNARRRSLDKWLDDGSSANSSSSSTCTKA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccagctgtcgatggagaacattggcgatctgcacggagtgagccatgaaccg
gcggatctcatgaccggagacagcgctcatcacaggagccatcggagcagcctatcagcc
catgcgcgctccatgggcatggcatcaatcctggacagcggcgactatcatcaccaccgg
cccccggagcaccccgggctcgccacgcacctgcacccggccatgagcatggcgtgcgag
gctccccccgggatgagcatgagcagcacctacaccaccctcaccccgctgcagccttta
ccgcccatctccaccgtctccgacaaattcccgcaccaccatcatcatcaccaccaccac
catcatcatcacccgcaccaacggatcccggggaacgtcagcgggagcttcaccttgatg
agggacgataggggtctagccccgatgaacaacctttactctccctaccacaaggatgtg
gccagcatgggacagagcctgtcgcctctttcgggatccggattgagcggcattcacaac
tctcagcaggggctgccgccctacgcgcaccccggggccaccatgcccgccgagaagatg
ctcacacctaacggattcgaggcacaccaccccgcgatgttggctcgacatggggagcag
cacatgagcgcgtcttcggcgagcatggtgccgatcaacggcatccaccatcacccgcac
gcccatctcaacgcccagggccacgggcaggtgctgggctccactcgggagcataaccac
tcctccgcgcccggatcgcagctgaacaacggcagcaattcaggccagatggaagaggtc
aataccaaagaagtggcccaaagaatcaccacggaactgaaaagatacagcattccgcaa
gccatctttgcccagagggtgttatgccgctcgcaggggacgctttcggacctgctccgg
aaccctaagccctggagcaagctcaagtctggtcgggaaaccttccgcaggatgtggaaa
tggttgcaggagcctgagttccagagaatgtcagcgctcaggctcgcaggtgagagaaca
atagcgtgcaagagaaaggagcaggaccacggtaaaggcgagcgggggagcctctccaag
aagccccgactggtcttcactgatgtccagcgtcggactttacatgcaatatttaaagag
aacaagcgcccgtccaaagagttacaaatcaccatctctcagcagctgggcctggagctc
gccaccgtcagcaacttcttcatgaacgcgcgtcgacggagccttgataagtggctggac
gacggcagctcggccaactcctcctcctccagcacttgtaccaaagcatga
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