Squalius cephalus (European chub): 307160814
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Entry
307160814 CDS
T11930
Symbol
nr2f2
Name
(RefSeq) COUP transcription factor 2 isoform 1
KO
K08548
COUP transcription factor 2
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307160814 (nr2f2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scep03310
]
307160814 (nr2f2)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
307160814 (nr2f2)
Nuclear receptors [BR:
scep03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
307160814 (nr2f2)
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Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
DUF8512
Motif
Other DBs
NCBI-GeneID:
307160814
NCBI-ProteinID:
XP_079731196
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All DBs
Position
6:7646564..7924595
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AA seq
424 aa
AA seq
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MAMVVWRGSQDDVAETQGTLSSQAQGGLSLPTPQPGQLGLTASQVAPPTPQTPVQGPPNN
NTQSTPTNQTTQSEKQQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCR
ANRNCPIDQHHRNQCQYCRLKKCLKVGMRREVSLFTAAVQRGRMPPTQPHHGQFALTNGD
PLHCHSYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARMLFSAVEWARNI
PFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMD
HIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVR
SQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPY
MSIQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagtgtggagaggctcccaggacgatgtggccgagacccagggcaccctc
tcatcgcaagcccaaggaggactatcccttccgacccctcaaccaggccagctgggtcta
acggcctctcaggttgcccctccgacccctcagacacccgttcaaggacccccgaacaac
aacacacagtccaccccgacgaaccagacgacgcagtcggaaaagcagcagccacagcat
atagagtgcgtggtttgcggggacaaatccagcggcaaacactatggccagttcacttgc
gaggggtgtaaaagctttttcaaacggagcgtacgaaggaacctcacttacacatgccgt
gccaacaggaattgtcccattgaccagcaccatcgcaatcagtgtcagtactgccgcctc
aaaaaatgcctcaaagttggcatgagacgggaagtttctctttttactgcagccgtgcaa
aggggacggatgccacccacacagccacaccatggtcagttcgccttgacaaatggggac
ccactgcactgccattcctacttatccggatatatctctctactactacgagcggagccc
tacccaacttctcggtatggcagtcaatgcatgcagcccaacaacatcatgggcatcgag
aacatttgtgaactggcagccaggatgctgtttagtgcggtagagtgggccaggaatatt
cccttcttcccagacctccagattaccgaccaggttgcccttttgaggttgacctggagt
gagttgtttgtgctcaacgctgctcaatgctccatgccgctccatgtggctccacttctg
gcggcggctgggctccatgcctcccccatgtctgcggacagagtggtcgcctttatggac
cacattaggatcttccaagaacaagtagaaaagctcaaagctttgcacgttgactctgct
gaatacagctgtttaaaggccatcgttttattcacttcagatgcttgtggcctgtcagat
gtggcccatgtggaaagtttgcaagagaagtcccagtgcgctctggaggagtacgttcgg
agccagtatcccaaccagccaactcgatttgggaagttattactgcgcttgccctctctc
cgtacagtctcgtcttcggtcatagagcaattatttttcgtccgattggtaggtaaaacc
ccaattgaaaccctcatcagggatatgttgctgtcggggagcagttttaactggccttac
atgtcgattcagtag
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