Squalius cephalus (European chub): 307160817
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Entry
307160817 CDS
T11930
Symbol
sema6d
Name
(RefSeq) semaphorin-6D isoform 1
KO
K06842
semaphorin 6
Organism
scep Squalius cephalus (European chub)
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Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
307160817
NCBI-ProteinID:
XP_079731203
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Position
6:39588129..39717708
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AA seq
1078 aa
AA seq
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MGWRELKTDLLLLLLLMASHLEAVSFPEDNIPLEVVDRHYARQYPVFRGRPSGNESQHRL
DFQLMTKIHDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRETCAMKGKHRDE
CHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVAL
FADGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGDFVYFFF
REIAAEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVL
QAITDIIDINGVPSVVGVFTTQLNSIPGSAVCAFSMEDIEKAFRGRFKEQKTADSVWTPF
PEEKLPKPRPGCCAGHGSAESYKTSIEFPDETLQFIKSHPLMDASVPSIGDEPWFTKTRV
RYRLTALAVDNTAGPHKNYTVVFIGSEAGILLKVLAKTSPLSLNDSVLLEEIDVFNQAKC
LSSNEDDRGILSFHLDKDTHTLYVAFSSCVVRIPLSRCERHSSCQKSCIASRDPYCGWMS
HGACERIPAAMQTGYEQDVEYGNTAHLGDCHEFLATTSAPDFKSYGDPTSDMELPSSSVT
VPASSEPIQSLQTIPTQTPQLFGSRKSVLRDEPATSHSVEPIPGVLEGVWEIQAGESNQM
VHMNILISCVLAAFLLGAFIAGMVVYCYRDAFLRTPRKIQKDAESAQSCTDSTGSFAKLN
GLFDSPVKEYQPDMDSPKLYTNLLSNGREVPTTGDTKTMLLSGQPPELAALPTPESTPVL
QQKSHQPIKNQWERAHGKISSSRKEGPPKSPQYLPSSPPPHSAISNPHIPSAVVLPNATH
EIRGSFSTPEGPQAEKKIQNSDQHGSKSGRKDQRRTVDARNTLNDLLKHLNESSPPKAIM
VEMPKSRQHLMLEPIVSPTEIPPKVPSREASLYSPSSSLPRNSPTKRVDVPTTPTSPTGQ
MGTLERQRYHRSSSQRHSISSPPKGLHSPSGAIVSRQPSMNRGGYMPPTPTPPTRLDSHG
VPMAMTPSVSRQSSYSGHGSLPRTSIKRTASLKPDVPPKPNGFAPQTAQMRAVNKYSY
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggggtggcgagaactgaagactgacctgctgctgctactgctgctgatggcgtcccac
ctggaggctgtgagctttcctgaggacaacatccctttagaagttgtggacagacactat
gcacgacagtacccggttttccgtggacgcccctctggcaacgaatctcagcatagactg
gactttcagctgatgaccaagatacatgatacactcttcatcgctggcagggaccaggtg
tatttagtgagtctaagagagtcctacaggaatgagataattccatacaggaagctgacg
tggcggtcggggcaggcggaccgggagacgtgtgccatgaagggaaagcacagagacgag
tgccataatttcattaaagtcctggttccgagaaatgatgatcttgtattcatctgcgga
acaaatggtttcaaccccatgtgccgttactacaggttggataacctggagtttgatggg
gaagagatcagcggtttggcccgatgcccatttgacgccaagcagacaaacgttgccctg
tttgctgacggtaagctgtactcagccacggtggcggacttcctggccagcgatgctgtg
atttatcgcagcatgggagacggttctgcccttcggacaatcaagtatgattccaagtgg
ttaaaagaaccacatttcctccatgcagtggattatggggatttcgtctacttctttttc
agagaaatcgccgctgagcacaacaacttgggaaaggcggtttactccagagtggctcgg
atctgtaaaaatgacatgggagggtctcagcgggtgctggagaaacactggacatctttt
gttaaggctcgcctgaactgttccgttcctggagaatcatttttctactttgatgtcctt
caggccattacagacataatcgacattaatggggtgccttctgtggttggagttttcacc
acccagttgaacagtatccctggctccgcggtgtgtgcgttctccatggaggacattgag
aaagcattccgtggccgtttcaaagagcagaagacagcagattcagtgtggacaccattt
ccagaggaaaagctgcccaagcccagacccggctgctgtgcgggacacggttcagcggag
tcctacaaaacctccatcgagtttccagacgagacccttcagttcatcaagtcacaccca
ctcatggacgcctcggtcccctccattggagacgaaccgtggttcaccaaaacaagagtc
aggtataggctaacggcactcgctgttgacaacactgcaggaccccataagaattacaca
gtggtattcattggctctgaggcaggcatcttgctaaaagttctggcgaagacatccccg
ctgtctttgaatgacagcgtcctactggaagagatcgacgttttcaaccaagccaagtgt
ttatccagcaatgaggatgataggggaattctgtctttccacctagataaagacacccac
acgctctatgtggccttttccagctgtgtggtcagaataccactcagccgctgcgaacga
cacagttcctgtcaaaagtcttgtattgcttccagagacccgtactgtggatggatgtca
catggagcttgtgaacgtattcctgcagctatgcaaactggttatgagcaagatgttgaa
tacggcaatactgctcatctcggcgattgtcatgaatttttggccactacatcagcgcca
gatttcaaatcatatggcgacccaacctctgacatggagttgccatcctcgtcagtcaca
gtgcccgcaagttctgaacccatacaatcactccaaaccatccccactcagactccccaa
ctctttggctcacggaaatctgtgctccgcgatgaaccagccacttcacattctgttgag
cctataccaggtgtgctggagggtgtgtgggaaatacaagcaggtgaatctaaccagatg
gtgcacatgaacatccttatctcctgtgtgttagctgcattcctgcttggtgcattcatc
gccggcatggtcgtttactgctatagagacgctttccttcgcacaccacgtaagatccaa
aaagatgcagagtcagcacagtcctgcactgattccactggcagctttgccaagctcaat
ggtctgtttgacagtcctgtcaaagagtaccaacccgatatggattctcccaaactctac
accaacctgttgagcaatgggagggaagtgccaaccaccggagacactaagacaatgctc
ctgagtgggcagccaccggaactagcagcactgcctacgcctgagtccacacctgtgctg
caacagaagagccatcagccaatcaagaaccagtgggagagagctcatggtaagattagt
agctcccgcaaagaaggaccaccaaaaagcccacaataccttccctccagtccacctccc
cattctgccattagcaacccccacatccctagtgctgttgtactgcccaatgccacacat
gagatcaggggatcattcagtactcccgaagggcctcaagcagaaaagaagatccagaat
agcgatcaacatggttccaaatctggccgtaaagaccagcggcgcactgtggatgccagg
aacacgctgaacgacctcttgaagcatctaaatgagagcagccccccaaaggccatcatg
gtggagatgcccaaatcccgacagcacctaatgctggaacccattgtaagcccaacggag
attccacctaaagtcccaagccgagaggcctccttgtactctccctcttcatctttaccc
aggaatagcccgactaaaagagtggatgtgccgactacaccaacatcacccacagggcaa
atgggaacactcgagagacagcggtatcaccgcagctcttcccagcgacactccatatcc
tcgccacccaaagggctgcactcacctagtggggccatagtgtcccgccaacctagtatg
aacagaggtgggtacatgcccccaactcctaccccacccactagactagactctcacggg
gtaccaatggctatgacaccttctgtatcccgacagagcagctacagtggtcacggatca
ttaccacgaacatccatcaaacggacagcatcgttaaagcccgatgtgccacccaaaccc
aacggttttgcaccacagactgcacaaatgagggcagtgaacaagtatagctactga
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