Squalius cephalus (European chub): 307161029
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Entry
307161029 CDS
T11930
Symbol
sap130b
Name
(RefSeq) histone deacetylase complex subunit SAP130b
KO
K19192
histone deacetylase complex subunit SAP130
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scep03036
]
307161029 (sap130b)
Chromosome and associated proteins [BR:
scep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
307161029 (sap130b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
307161029
NCBI-ProteinID:
XP_079731608
LinkDB
All DBs
Position
7:25079050..25092691
Genome browser
AA seq
1047 aa
AA seq
DB search
MSSQQYPRPGLPSGLGQGQTPGSNTTGLSGSQKNTGGHEDSNHAPRELMSSGATAFRDDK
QETVVVRPYPQPQTHPLPHGIAPTLPPPLPQHLPIQPGTSVSVSAAPSHLPQGLSLAFTE
GPLKSALKATMPSRVIAPAPVSTPGHLTLPSKVPAHITATMESTQASGIPVATISSQQGH
TGNLHHLMTNVQIIRSGAPALQIGSSAAPPHPFTSHLPRGAAAAAVMSSSKGTTVLRPAA
GPSSATGQPTVQHIIHQPIQSRPIVTTSTAVLPTVVAPVNATRPQSPVITTVAAHSGDMV
HGRSAVTIHPPQATLSIQRPPPSRDTSPRITLPSHPAIAAQKALPHSAQKPIFSTVTPVA
AATVAPIQATNTAPSPSTTGSTPHTQLSSSNIVTMTVASHSSHASAVTTSTIPVAKVVPQ
PNTHISPRIQPEYTGERGNLIPISGHRSSPNPITMENRTDNRQSVPVQFQYFLPTYPSAP
YPLTHTYTPITSSVSSIRPYPVTAQAPSAAMPAQASVGVASAVHLNSMQLMTVDRITQIN
TQNIQPGAMAAQGIQPTPIQAQGLHPSAQITTTSIQPTQINQQQPPTESKASVVLADGST
LVANSISNAFNNSQPATTVAQTHSQSANAATPSLVTSPRPSILRKKPAHEGAAVRKNLIP
GHLSDSTTSRIDGHIRSASGSPRPAGVKPKPDIHMSLVPSVAAAIEAIPSQGNEQQPQHL
GPPPSQLASQPLPSLLTSATPPSQPTPALSAIPPAMAVTPPIPSMANVVAPPTQPAASTT
SACAISSTLPEINIKQEAEPMETTKPVASGPNSGAQMLAVPATDVTLGASPRKKPRKQQH
IISTEESEMMETNSTDEEKFPPKPLSLRAEKRKSPPKEYIDEEGVRYVPTRVRPPVTLLR
HYRNPWKAAYHHFQRYTDIRVKEDKKGTLQDVANQKGVACRAQGWKIHLCAAQLMQLTNL
EHDVYSRLTTLQEGLVPKKKAGADDDIHRINELIQGNMQRCKLVMDQITEARDSMLKVLD
HKERVMKLLNKNSSTKKLNKLKRKDRA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcagcagtatccacgtccaggtctgccatctggtctgggacaaggacaaaca
ccaggcagtaacactacaggactttcaggaagtcaaaagaatacaggaggacatgaagac
tctaatcatgctccgcgtgagctgatgtccagtggagccacagcgttcagagatgataaa
caggagacggtagtggtgcgaccctacccccaaccccagactcatcccttaccccacgga
atagctccgactctgccccctcctctccctcagcacctccccatccagccaggcacatcc
gtctctgtgtcagcagcaccatcccacctcccacagggtctttccctagccttcactgag
ggtcctctaaagtctgccctgaaggcgaccatgccaagccgtgtgatagctccagcacct
gtgtcaacaccgggccacctcaccctcccctctaaggtgcctgctcatatcaccgctacc
atggagtctacacaggcctctggtattcctgtggcaaccatcagtagtcagcagggtcac
actggtaacctgcatcatctaatgacgaacgtgcagatcatccgcagtggagcccctgcg
ctgcagatcggatcctccgctgctcctccgcatcctttcacctcccatttgcccagagga
gcggctgctgcggctgtgatgtcaagctccaaaggaaccacagtgctgagaccagcagct
ggtccgagctccgccacggggcagcctacagtccagcacattatccatcaacctattcag
tctaggcctatagtcactacctctacggctgttctgcctactgtagtggctccagtgaat
gccaccagacctcagtctccggtcatcaccacagtggctgcccactccggagacatggta
cacggtcgttcagcggtgacgatccacccaccccaagcgaccttgagtatccaacgccct
ccaccctcacgcgacacatccccccggatcaccctgccctcccaccctgccattgctgct
cagaaagcccttcctcactctgcacagaagcccattttcagcactgtgacacctgttgct
gccgcaacagtggctccaattcaggccaccaatactgcaccatcaccttctacaacaggc
tccaccccccacactcaattatccagtagcaacattgtcaccatgacggtggcctcccac
tcctctcatgcctcagcagtgaccacatccactatccctgtggctaaagtcgttccacag
cccaacacgcacatatcaccacgtatccagcccgaatacactggagaaaggggcaacctc
atccctatctctggtcatcgctcctctcccaaccccataaccatggagaaccgcactgac
aacagacaatctgttccagtgcagtttcagtacttcctgcctacctacccatcagcacca
tatccgctgacccacacttacacccctatcaccagctctgtgtcatccatacgcccttat
ccagttactgctcaggcgcccagtgctgccatgccggctcaagccagtgtaggagttgca
tctgcagttcacctgaactctatgcagctgatgacggtggaccgcatcacccagatcaac
actcagaacattcagccaggtgccatggcagcacagggcatccagcccactcccatccaa
gcccagggcctccatccgtctgcccagataaccaccacaagcattcagcctacacaaatc
aaccaacaacaacccccaacagaatctaaagcttcagttgtgctggccgatggttccact
ctagtggctaactctattagcaatgcgttcaacaacagtcagcctgccaccactgtggcc
cagacgcacagtcagagtgccaacgcggcaaccccctcccttgtgacgtcccctcgaccc
agcattctgcgcaagaaacctgctcatgaaggtgctgcagttaggaagaacctgatccca
ggtcatctcagtgactccacaacctcaagaattgatggacacatcaggagtgcatcagga
tcacctcgtcctgcaggagtgaagcccaaacctgacatccacatgagcctcgttccatca
gtagctgcggctatagaggctattcctagccagggaaatgaacagcaaccacaacacttg
ggaccacctccctcccagctggcctctcaacctctcccctccctcctgacgtcagccacg
cctccctctcaacccactcctgctctctcagccattccccctgccatggcagtcaccccg
ccaatcccctccatggccaatgtagtggcccctcccactcagccagcagccagcaccact
tcagcatgtgccatcagctccacccttccagagattaatattaagcaagaggcagagcct
atggaaactacaaaaccagtggcatcagggccaaacagtggtgcacagatgttggcagtc
cctgctacagacgtcaccctgggagcctcacccagaaagaagccccgcaagcaacagcac
atcatttccactgaggagagcgagatgatggagaccaacagcacagatgaggagaaattc
ccacccaaacccctcagcctacgtgcagagaaacgcaagtcccctcctaaagaatacatc
gatgaagagggagttcggtatgttcctacccgagttcggcctccagtcactctgctgcgc
cactaccgcaacccctggaaagcagcgtaccaccactttcagagatacaccgacatccgt
gtcaaggaagacaagaagggaaccctgcaggatgtggccaatcagaagggagtggcatgc
agagcccagggctggaaaattcacctctgtgcagctcagctcatgcagctgactaatctg
gagcatgatgtctatagtcgtctgacgactctccaggaaggcctcgttccgaagaagaag
gccggagcagatgatgatattcaccgtataaatgagctcatacagggcaacatgcagcgc
tgcaagctggtgatggaccagatcacggaagcccgtgattccatgttaaaggtgctggat
cacaaggagcgtgtcatgaagctgctcaacaagaacagcagcactaagaagctcaataag
ctgaagcgcaaggacagagcgtga
DBGET
integrated database retrieval system
