Squalius cephalus (European chub): 307161897
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Entry
307161897 CDS
T11930
Symbol
rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307161897 (rnf126)
04121 Ubiquitin system [BR:
scep04121
]
307161897 (rnf126)
Enzymes [BR:
scep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
307161897 (rnf126)
Membrane trafficking [BR:
scep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
307161897 (rnf126)
Ubiquitin system [BR:
scep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
307161897 (rnf126)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
zf-Nse
HypA
zf-RING_16
DUF8608
CDH-cyt
zf-HC5HC2H
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
307161897
NCBI-ProteinID:
XP_079732974
LinkDB
All DBs
Position
7:complement(44010464..44022216)
Genome browser
AA seq
309 aa
AA seq
DB search
MAEAPPRPCRFFCHRCSEEISPRLPDYICPRCESGFIEELPGEGSAENGSTSTASNDQNR
PSFENVDQHLFTFPHGYGQFALGIFDEGFDFRAGLPGEDNRDAENRREREMASRQRYMSR
QPRGRHVPRRQGVRHEGVPTLEGIIQQLVNGIIAPTAMPNMAMGPWGMLHSNPMDYAWGA
NGLDAIITQLLNQFENTGPPPADKEKIKSLPTVQINQEHVGAGLECPVCKEDYSAGENVR
QLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSSSSP
SNENSSNNS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcccccgcggccctgccggttcttctgtcaccggtgttcagaagagatc
agccctcggctcccggattacatctgtccgcggtgtgagtctggcttcatcgaggagttg
cctggagaaggaagtgcagagaatgggtccacgtctacagcctctaatgatcagaatcgt
ccctcgtttgagaatgtggaccagcacttgtttacgttcccgcatggatatgggcagttt
gctctggggatcttcgatgagggcttcgacttcagggcaggtttgcccggggaggataac
cgtgacgcagagaaccgcagagaacgggagatggcctcacgacaacggtacatgtcgaga
cagccacggggacgccacgttccccggagacaaggggtgcggcatgagggtgtacccact
ttagaaggaatcattcagcaattagttaacggaattatcgctccgacagcgatgccaaac
atggcgatgggaccatggggaatgctgcattctaacccaatggactatgcatggggtgcc
aacggattagatgccatcataacacagttattaaatcagtttgaaaatacgggtccccct
ccggcagacaaagagaagattaagagtcttcctacagtccagataaaccaagagcacgtg
ggtgctggtctagagtgccctgtttgtaaagaagactacagtgccggagagaacgttaga
caacttccctgcaatcatctctttcacaacgactgtatagttccctggctcgagcagcat
gacacgtgtccggtgtgcaggaagagtttgagcgggcagaacacagccacggatccgccc
ggcctatcagggatgaatttctccccctcttcctcctcctcttcctcctccagctctcca
agcaacgagaactcctccaataactcgtaa
DBGET
integrated database retrieval system
