Squalius cephalus (European chub): 307162131
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Entry
307162131 CDS
T11930
Symbol
chmp5a
Name
(RefSeq) charged multivesicular body protein 5 isoform 1
KO
K12198
charged multivesicular body protein 5
Organism
scep Squalius cephalus (European chub)
Pathway
scep04144
Endocytosis
scep04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
307162131 (chmp5a)
09143 Cell growth and death
04217 Necroptosis
307162131 (chmp5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307162131 (chmp5a)
Membrane trafficking [BR:
scep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
307162131 (chmp5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
NPV_P10
Prefoldin_2
PIBF1
Histone_HNS_N
Hydantoinase_B
Alpha-E
Big_3_3
C2_ITFG1
Spectrin_3
DUF848
DUF6674
RUBC_PIKBD
DUF87
STX17_N
Motif
Other DBs
NCBI-GeneID:
307162131
NCBI-ProteinID:
XP_079733350
LinkDB
All DBs
Position
7:29964383..29967622
Genome browser
AA seq
219 aa
AA seq
DB search
MNRIFGRSKQTPPPNLSDCIGNVDTRVESIDKKIARIDAELMKYKDQMKKMRDGPSKNTV
KQKAMRVLKQKRMYEGQRDQLSQQSFNMEQANYTIQSLRDTKTTVEAMKIGAKEMKKAYK
QVKMDQIEDLQDQLEDMMEEANEVQEALSRSYGTPEIDEDELEAELDALGDELLLDDDSS
YLDEASSAPSIPEGIPSDTKTNKDGVLVDEFGLPQIPAT
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaattttcggtcggagtaaacagacgcctcctcctaacctttctgactgcata
ggcaatgtggatacgagggtcgagtcgatcgataagaaaatagcgagaatcgacgcagag
ctaatgaagtataaggaccagatgaaaaagatgagggatggaccctcaaaaaatacagtg
aaacagaaggcgatgagagtgctgaaacaaaaaagaatgtatgagggtcaaagagatcag
ctttcccagcagtcatttaatatggaacaagccaactatacaatccagtcattaagggac
accaaaacaacagtggaggctatgaagattggagcaaaagaaatgaagaaagcatataaa
caagtgaagatggatcagattgaagacctgcaggatcaactggaagacatgatggaggag
gccaacgaggtgcaggaagctctcagtcgcagctatggcacaccagagatcgatgaggat
gaactggaagcagagctggatgctctgggagatgagttactgctggatgatgacagctct
tatttagatgaagcctcgtctgcaccctccattcctgaaggaatacccagtgacactaaa
accaataaggatggcgttctggtcgacgagtttggccttccacagatccctgccacataa
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