Squalius cephalus (European chub): 307162496
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Entry
307162496 CDS
T11930
Symbol
sall3b
Name
(RefSeq) sal-like protein 3b
KO
K19871
sal-like protein
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307162496 (sall3b)
03036 Chromosome and associated proteins [BR:
scep03036
]
307162496 (sall3b)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
307162496 (sall3b)
Chromosome and associated proteins [BR:
scep03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
307162496 (sall3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_6
zf-Di19
zf-C2H2_11
UBZ_FAAP20
B129_C2H2-zf
zf-C2HE
DUF6890
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
307162496
NCBI-ProteinID:
XP_079733988
LinkDB
All DBs
Position
8:31630704..31641052
Genome browser
AA seq
1247 aa
AA seq
DB search
MSRRKQAKPQHLRSDEEGTQSDKSPDNALRLRGGDEEDSGTESRSGGEETHVCERCCAEF
FKWSEMLEHQQKCTEDPPVLIVKENEEKAICRESPTESLLSAHSDSAEMEASELNSELAE
KVDEMPEETHIIDLDEQMDISLPEHKTSNLSPLQLDNENPTSSPAPPTTNHYDMPSTNVT
LEILHSTRVAVAQFSQSIHCAGSAGKLNSAAIPMILEQLMALQQQQVQQLQLIEQIRSQV
AVMNRQPTQAALNPASKSLPSDSNTYNFQGIAPPPVLPLSGVMPSAVNGHASVSQASMLS
RPPLLSSQPSSGQIGSRALESATASLTSSSPHLFSYSGASPLLPTCSGSLSNVSNTQSVS
TPSPLSACQSSLLSPSANLPLLPQSPPNGVIFPNPLASIAATASALDPLAAMMKHRKGKL
PGVSIFDNKPNSEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKG
NLKVHFQRHKEKYPHVQMNPYPVPEYLDNIPTSSGIPYGMSFPPEKAGPTWLDSKPVLPT
VPSSMGLQLPPTVPIIESLSDSFTSTPSERSPHRPSPARGELAPSSPNPTGTETDMSTIA
ASPKSIREEEITHSFNTEEVHLPSNSMTRNGNNPNSLLSQSMSTETPVKGNVSESTDVPS
AVNKSPSPPLISDQFRAKFPFGGLQDSMQTSETSKLQQLVENIDKKMMDPNQCVICHRVL
SCQSALKMHYRIHTGERPFKCKVCGRAFTTKGNLKTHFGVHRAKPPLRIQHSCPICQKKF
TNAVVLQQHIRMHMGGQIPNTPLAETIYEKDTDMESFDSMSTYDDDCLDDISFEEEADVV
ENSENTLSSFSDSPPPISSLSTSVSESQNVRSDSSISLSQSNGKKMVKYGPMDNDLHALG
LITTGEMENHSMGTRLMPHSSSSIHIPPYLNSQPEGQHEHPVSLNLSSKIPEETAIVKSE
TTDCPAANAVNGVTLNQTGIQPIQSTVKKENPFNVQCFSKEHENAQRFTDQDTKNSPTAV
KLESACSRPYMLKEGPFPAFGLQSPTSRSEVMIPGVTTLTGPPPPRRTPKQHNCSACGKN
FSSASALQIHERTHTGEKPFGCSVCGRAFTTKGNLKVHMGTHMWNNTPARRGRRLSVENP
IALLGGDALKFSEAFQKDLAARAMNVDQNFWSRYAAAITNGLAMRNNEISVIQSGGVPQL
PAITVPTDKASTGNSPPITAMEKTGLERGTGQHFSMMIEDKKDIGIN
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaagaaagcaagcgaaacctcagcatctcaggtcggacgaagaaggaacacag
tcggacaaaagtccggataacgcacttcgcttgaggggaggcgatgaggaggacagcggc
acagagagccgcagcgggggtgaagagacacacgtgtgtgagaggtgctgtgctgaattc
ttcaagtggtccgaaatgctggagcaccaacagaagtgcacggaagacccccctgtgctg
atagtaaaagagaatgaagagaaggccatttgccgggaatcaccaacagagtcccttttg
agtgcccacagtgactcagcagaaatggaggccagcgagctcaactccgagctggctgag
aaagtcgacgagatgcctgaggaaacccatatcatcgacctggatgaacaaatggatata
agtttgcctgagcataaaacatcaaacctcagccctctacaacttgacaatgaaaacccc
acctcttctcctgcaccacctacaaccaatcattatgacatgcccagcaccaatgtgacc
ctggagattcttcacagcacccgagtggccgttgctcagttttcccagagcattcactgt
gcagggtccgcaggcaagctgaactcagctgcgatacccatgattctggagcagttgatg
gcgctgcagcagcaacaggttcagcaattgcagctcattgagcagatccgcagccaggtc
gctgtaatgaataggcagcctacgcaagccgcccttaatcctgcctcaaaaagcctgccc
tctgactcgaacacttacaatttccagggcatcgctccaccccctgtacttccattatct
ggggtcatgccctctgcagtgaatgggcatgcctctgtatcccaggcgtctatgctttcg
agaccaccgttgctgtcttcccagccaagcagtggacaaatcggctccagagcattagag
agtgccactgcttccttaacaagctccagccctcatctcttcagctacagcggggcttcc
ccgctcttacccacttgtagtggatcgctctctaacgttagtaacacccagtccgtaagc
actcccagtccactatcagcttgccagagtagcctccttagcccttctgccaacctacca
ttactacctcaaagccctcccaacggagtcatatttcccaatccactggccagcattgca
gccactgccagtgcattagacccactagctgctatgatgaagcaccgtaagggcaaactg
cccggcgtctccatttttgacaacaagcccaattctgaggacccattctttaagcacaag
tgtaggttctgcgctaaagtgtttggcagcgacagcgccttacagatccatttgcgctca
cacacaggtgagaggcccttcaaatgcaacatttgtggcaaccgtttctcaacaaaggga
aacctcaaagtccacttccaaaggcacaaggagaagtaccctcatgtccagatgaacccg
tacccagtcccagagtatcttgacaatatccctaccagttctgggattccatatgggatg
tcttttcctccagagaaggcaggacctacttggttagacagcaaacctgttcttccaact
gtgccatcctcaatgggtctgcagttgccgcccacagtaccaattattgaaagcttaagt
gattcatttacaagcacaccctctgaaagatctccacataggccatcaccagccagaggt
gaacttgccccatcgtcacccaatcccaccggcactgagacagatatgtctaccattgcg
gcctcccctaaatcaatcagagaagaagagatcacacacagcttcaatacagaggaagtg
cacctgccatcaaacagtatgactagaaatggtaacaaccccaacagcctgctttcacaa
tccatgtcaacagaaacacctgttaaggggaatgtatcagagtccactgatgttccttca
gctgttaataagtcaccctctcctccactcatctcggatcagttcagggccaagttccca
tttggtggtctccaagactctatgcaaacatctgagacatcgaagctccaacagcttgtg
gaaaacattgacaagaagatgatggatcccaatcagtgtgtaatctgccaccgcgtgctt
agctgtcagagcgcgctgaagatgcactaccgcatccatacaggggagaggccatttaaa
tgcaaggtttgtggacgagcattcaccacaaagggtaacttgaagactcactttggtgtc
caccgtgcaaagcctcctcttcggattcaacattcatgcccgatctgtcagaaaaaattc
acaaatgctgttgtgttacagcagcacatacgcatgcacatgggtgggcagattccaaac
actcctttggcagaaaccatctacgagaaagacacagatatggagagtttcgacagcatg
agcacttatgatgacgactgtcttgatgatatttcatttgaagaagaagcggatgttgtg
gagaacagtgaaaacaccctgagctctttttcagacagtccaccacctatctcttctctg
tcaaccagcgtatcagaatctcaaaatgtaaggagtgactcatccatcagtctcagccaa
tcaaatggaaaaaagatggtaaagtacggacctatggataatgatcttcatgctctgggc
ttgatcaccactggtgagatggagaaccatagtatgggaactagattaatgccacattca
tctagttctattcacattccaccctatctcaacagtcaacctgaaggccaacatgagcac
ccagtctctctgaacctctcctctaaaatccctgaggaaacagctatagtaaaatcggaa
acaacagattgtcctgcagcaaacgcagtcaacggggtgactcttaatcaaacaggaata
cagcctatccagtctacagtaaagaaagaaaaccctttcaacgtgcaatgtttcagcaag
gaacatgaaaatgctcaaaggtttactgatcaggatacaaaaaattcgccgactgcagtg
aaactggagagtgcttgcagtagaccatacatgctaaaagaagggcctttccctgcattt
ggcctgcagtctcccacctcacgctctgaggtgatgataccgggcgtcaccacactcact
ggaccaccccctccccgacggacccctaagcaacacaactgcagtgcatgtgggaagaac
ttctcttctgccagcgccttgcagatccacgagcgcacacacacaggcgaaaaacctttc
ggctgctctgtctgcggtcgagcgttcacaaccaagggtaatctcaaggtgcacatgggc
acccatatgtggaataacactcctgcccgtagaggtagacgactgtctgtggaaaaccca
attgcccttctgggcggtgacgccctgaaattcagcgaagcgtttcagaaggatttagca
gcgcgggccatgaatgtggaccaaaacttctggagccgatatgcagcagctattacgaat
ggcttagcaatgaggaacaatgaaatatccgtcattcagagtggaggagtcccccagctt
cctgccattactgtgcccacggacaaggctagcactggaaacagcccaccaatcacagcc
atggaaaaaacaggcttagaaaggggtactggacaacacttctccatgatgattgaggac
aaaaaagacatcggaatcaattaa
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