Squalius cephalus (European chub): 307162689
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Entry
307162689 CDS
T11930
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform 1
KO
K14296
nuclear pore complex protein Nup153
Organism
scep Squalius cephalus (European chub)
Pathway
scep03013
Nucleocytoplasmic transport
scep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307162689 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
307162689 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307162689 (nup153)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
307162689 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
307162689
NCBI-ProteinID:
XP_079734319
LinkDB
All DBs
Position
8:2987827..3020905
Genome browser
AA seq
1507 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKGKQQPGLITRVTDTVKSIVPSWLQKYFKNGEVAEGDG
AAVGIEQNNVAPPPNGNDEAVPLPDGRDSPEPSTSNTEPSTSRASLNFNEALSRPPLNRT
HLHFPSLDGSPALGGASALFSQPSTSTAPYSGSPFAVTSNFSLVKEIKDSSSQHEDDNIS
TTSGFSSRASDKDVPTSKTVPLLWSPESERTHSGSQPAHSGLKRPAFNLSVFGTSSSSVL
NSSALNSSQLGDSPFYPGKTTYGGAAAMRARSRPATPYQPPVRRQIKAKPAGAQPCGVTS
ATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDISNYQAKRKRLEPSVPPVQ
KLVVPAAAAVSGNRSMSFRPSLTPGGGNRAVDKNNRETPVRQSPPISDPSQAPSTSTSSM
SYPLSSTPAPSSAASGGGKMKRERAIRPSSKRPDDELAEDPDLPPASLPSNFTLPTFNFS
SPPPSSSFTSGTTPLATVSEEPPANKEPVAPSTPPSVPFTFSSPIVKATAASPPTFSPSA
GFTFSAPTLKTGPSYSNGKIVPTVAPVKSVASEEKEFEGPFKPAKVLKQGSVLDILKGPG
FASPSQNSADKPSQSASLSSVTFSGFGDKFRPSAGSWSCDSCLLQNKSSDKKCVACCAPQ
PNTDSASKSDSKPAEAPASISSLFAPPAGSWDCDTCLVRNKPEVIKCVACETAKPGTGVK
SRLTLPALSETSSTLSTTTMTAASSTATGLLGFGDKFKKPEGAWDCDVCLVRNKAQDDKC
VSCLSSKPGIVKIQAIPNPTEKPSTATGLLGFGDKFKKPEGAWDCDVCLVRNKAQDVKCV
SCLSAKPGAVAAVVSTPVSAPATSAASLLGFGDKFKKPEGSWECEVCSVQNKAVDQQCVA
CQSAKPGAKIESKGFSSSFGVQSNSTDSSSSGFKFGTGSTDSTSAGLKFGGSFSDSSTAG
GFKFGIGTSDSTSKSEGFKFGGSFSDAGSGGVKLGSASSESTATKESLTRATRAFEFSGS
MNDDIIEEKTKSQDSSAGFKFGGGSGITFSSQASGSENSAFLFGAKPNEKESSNSSFSFS
APQSKAEKENAPAFSETASTTSTSTTTTAANAIPVFGKSLVAESSASKFGEQATKEQTLV
TPTFTFGKPEEKKDTSSAFLFGASKEAEKPSANLGFSFSEPDPPKDFPKPTPTLTFGKTA
ESTEPPKPSFGFGQSITDTSAPTPNFGFMANSSSTPASSSSTPSLFITPTTSSLAPTPAP
SSTFVFGQSSSSELTMAKTFVFGQQDSQTPAPAAPSAAPAPAQPFQFGSGSNSSGPSFNF
GAVASSTPASAAPAPSANPSPFVFSSAAPSSGFGTGQAPIFGQNASQPSAPAFGSSAPSF
SASAPPASAFGAKSNSAPVFGQQTNPTPTFGSTAASTGQGGFQFGSTGGFGASGSNSNVF
AFGGAAAPATPAASPAMPALNPSGGGFGFSQTPAFNIGSGKGPFTPTPSGQNSIAGRKIK
TAVRRRK
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagatatcacatcgcttcaaaaccg
tatgccaaaggcaaacagcagcctggcctgatcactcgagtgacggacacagtgaagagc
atagtcccctcctggctgcagaaatacttcaaaaatggagaagttgcagagggtgatggc
gctgcggtcgggattgagcagaacaacgtggctcctccacccaatggcaacgacgaagcc
gtcccactccctgatggacgagactctccagagccgagcacaagtaacacagaaccatct
acaagcagagcatcgctgaacttcaacgaagctctttcgagacccccgctcaatcggacc
cacctgcacttcccctccctggacggctctccggcattaggtggcgcgagtgctctcttc
tcccagccctccacatctacagcaccctattcagggagccctttcgctgtaacctccaac
ttctccctggtaaaagagattaaggactccagctctcagcatgaggatgacaacatctcg
actaccagcggcttttcatcacgtgcatctgataaagatgtgcccacgtcaaagactgtg
ccgctcctctggtccccagagtctgaacgcacccactctggatcgcagccagcccattct
gggctcaagagaccagccttcaacctgtcagtctttggcacttcctcatcatcagtgttg
aacagttcagcactgaactccagtcagttgggggactcgcccttctacccagggaagacc
acatatggaggagctgctgcgatgagagctcgttctcgcccggctactccttaccagcct
cccgttcggaggcagataaaggctaagccggctggagctcaaccctgtggagtgaccagc
gccacagcgagacgcatcttacagtccttggagcgcatgtccagtccacttgctgatgca
aaaagaattccgtctacggtttcatctcctctgtcagcttctttgaatcacacagacctt
gacatttcaaattaccaggcaaaaaggaaaaggctggagccgtcggtccctcctgtgcag
aagctggttgttcctgcagctgctgcggtgtctggtaaccggtcgatgtccttcagaccg
tcgctcaccccgggtggagggaacagagcggtggacaaaaacaacagggagactccggta
agacaatcccctccaatttcagatccctcccaggctccatctaccagtacaagcagtatg
tcctacccgttgtccagcaccccagcgcccagcagcgctgcttcaggagggggcaaaatg
aagagggaaagagcgattagaccttcatccaaacggcctgacgatgagcttgctgaggac
ccagacctgccgcctgcttctcttcccagcaatttcactttgcccacatttaatttctcc
tctcctcccccttcctcctcgttcacctccggcacaacaccacttgcaaccgtctctgag
gaaccgccagcaaataaggagccagtggcaccatccacaccaccatctgtcccattcaca
ttctcctcacctatcgtaaaggcaacagcagccagtcctccaactttctctccatcagct
ggattcaccttcagtgcacctactttgaaaacaggcccttcttactccaatgggaaaatt
gttccaacagtagcaccagtcaaatcagtggccagtgaggaaaaagagtttgaaggaccc
ttcaaacctgcaaaggtcttaaaacagggcagtgtattggatatacttaagggacctggg
tttgcatccccctctcagaactctgctgataaaccttcacagtctgcttcattatcatct
gttactttttctggtttcggtgacaagtttaggccatctgcaggttcatggagctgtgac
tcttgcctattgcaaaacaagtcctcggacaaaaagtgtgttgcttgttgcgcaccacaa
cccaacacagactctgcctctaaatcggacagtaaacccgcagaagctcctgcaagcatt
agttctctctttgctcctccagctggtagctgggattgtgacacatgtttggtcagaaac
aaaccggaagtaattaaatgtgtagcttgtgaaacggccaaacccgggactggagtgaaa
tccagactgactctaccggctctttctgagacctcatccactctctctacaaccacaatg
actgccgcttcatctacagcaactggactgttaggatttggggacaagtttaagaagcca
gagggggcttgggattgtgacgtgtgcctggttcggaacaaggcacaggatgacaaatgc
gtatcctgtctgagctctaaaccaggaatcgttaaaattcaagcgatacccaaccctact
gaaaagccatctacagcaactggactgttaggatttggggacaagtttaagaagccagag
ggggcttgggattgtgacgtgtgcttggttcggaacaaggcacaggatgtcaaatgtgta
tcctgtctgagcgctaaaccaggagctgtagccgctgtggtctcgactccagtctctgca
cctgcaacatctgctgcgtctttgttgggattcggggacaagttcaagaaacctgagggg
agctgggagtgtgaggtgtgcagtgttcaaaataaggcagtggaccagcagtgtgtggcc
tgccagtcagcaaaacccggagctaaaatagagtccaaaggttttagttcatcttttggc
gttcagtccaacagtacagactcaagttcatctggttttaagtttggtaccggctctacg
gactcgacctctgctggattaaagttcggaggctctttctcagattcttccaccgcggga
ggatttaaatttggaatcgggacttccgactcgacctcaaaatcagagggcttcaaattt
ggaggctcgttctcggatgcaggttctggtggggtcaaacttggaagtgcctcgtcagaa
tccacagcgacaaaagagagtttaacaagggccacaagggcctttgaatttagtggatcc
atgaatgatgacataatcgaagaaaaaactaaatctcaggattctagtgcgggatttaaa
tttggtggcggaagtggaatcactttcagctctcaagcttctggctctgaaaactctgca
tttttatttggagctaaacccaatgagaaagaaagctcaaattcgtcctttagtttctct
gcgccccagtccaaggctgagaaggaaaatgctcctgctttctcagaaactgcttcaacc
acctcaacgtcgacaacaacaacagcagcgaacgccatccctgtttttggcaagtcttta
gtagcagaatcttctgcctcgaagtttggggaacaagcaacgaaagagcaaacgctggtg
acgcctaccttcacctttggaaaaccagaagagaaaaaggacacctcaagtgcgttcttg
ttcggtgcttccaaggaagctgagaaaccatcggcaaacttgggcttctctttcagcgag
ccagaccctccaaaagatttccccaagcctacgccgacgcttacgtttgggaaaactgct
gagtcaacagaacccccaaagccgtcatttggttttggacagagtataacagacacatct
gctccaacgcccaattttggcttcatggccaactcctcgagcaccccagcttcatccagc
tccacccccagccttttcatcactcccactacctcttccctggctcccacccctgctccc
tcaagcacctttgtattcggccagagttcctcctctgaacttaccatggcaaagactttc
gtgttcggacagcaggacagccagaccccggcacctgcggctccttctgctgcacctgca
ccagcacaacctttccaatttggctcgggctcaaactcctctggcccttctttcaatttt
ggtgctgttgcgtcctccaccccagcctctgccgctccagctccgtctgccaacccttcc
ccgtttgtctttagttctgccgctccttcatccggctttggcaccggacaggccccaatc
ttcggacaaaacgcgtctcaacccagtgctcctgcgttcgggtcatcggcaccttcattc
tcggccagcgctcccccagcgtctgcgtttggagccaagtccaactccgcccctgtattc
ggtcagcaaaccaatcctacacctacgtttggatcgacggctgcctccacgggccaaggc
gggttccagttcggcagcaccggtgggtttggagcatcggggagcaacagtaatgtgttt
gccttcgggggggcagcggctccagcaactcctgctgccagtccagcgatgcctgcgcta
aacccctccggcggaggcttcggcttcagccagaccccggccttcaacatcgggtcagga
aagggtcctttcacaccaacaccatctgggcagaattcaatcgctggacgcaaaatcaaa
acggctgttcggcgcaggaagtaa
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integrated database retrieval system
