Squalius cephalus (European chub): 307163088
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Entry
307163088 CDS
T11930
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
scep Squalius cephalus (European chub)
Pathway
scep04010
MAPK signaling pathway
scep04020
Calcium signaling pathway
scep04148
Efferocytosis
scep04218
Cellular senescence
scep04310
Wnt signaling pathway
scep04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
307163088 (nfatc1)
04310 Wnt signaling pathway
307163088 (nfatc1)
04020 Calcium signaling pathway
307163088 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
307163088 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
307163088 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
307163088 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307163088 (nfatc1)
Transcription factors [BR:
scep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
307163088 (nfatc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
307163088
NCBI-ProteinID:
XP_079735068
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All DBs
Position
8:31712216..31751707
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AA seq
869 aa
AA seq
DB search
MKSAEEDAYGYSQNTSISLPLSNPCPSSQYHNLQTSPSLSISISQPSSFSPQDDMSSVGY
FQTSGPRSNGAPTLESPRIEITAYGQFPEDEVEENSVPVAKRVNSIVTLTLPSIDGYRDP
TCLSPASSVSSRSCHSDASSYESGFSYNYDNSPQNSPWQSPCVSPKGSSSLQSCTLGASP
RHSPSGSPRASITDDNWIGTRGSRPNSPCGGKRKYSFNGVHSQKYHPYSPNQSPGPSPQT
SPRLSVTEDTWLANTNQYTNSAIVAAINALTTDGLTDIGEGIPLKSRKTSLEHSASMNLK
VEPGGEETGSLELCQDDFSARLPFKKETYCSGFLDVPQHPYWSKPKPYISPSLPALDWQL
PSSSGPYSLQIDVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLTLQLFIG
TADDRLLRPHAFYQVHRITGKTVSTPSHEVMQSNTKVLEIPLLPESNMRAIIDCAGILKL
RNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRMVSLQVASNPIECSQRSAQELPLVD
KQSMESCAASGGEQMLLSGHNFQPDSKVVFVERAQDGHHIWEMEAKVNRESFKSVALLVE
VPSYRNQRISNPVQVNFYVCNGKRKRSQYQRFTYLPTNVPTIKTEPRDDYDLPQVCAPLH
PVGLALHPKPYYSPPAMTPMIPSELRPCVTGSFASSPQRLAAKPTSLSCSSSPSTSPKLQ
DLSPPHISTKCLSVGLNLGSQSPTVPHVSTIQPTPGRYPQSMLYPTGSAASSPGSHPSTP
NSAPELPFTPSLNLTQSQATSEASALAAHITKGPVRSGSSPLLQEEEDAPAMLAVSIKQE
PQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggcagaggaagatgcctacggttacagccaaaacaccagcatttcacttcct
ctgagcaacccctgcccatcttcccagtaccacaatctccagacaagcccttcattgtca
atatctatcagtcagccatcctcattctcccctcaagatgacatgagctcggtgggctac
ttccaaacatccggcccccggtccaatggagctcccacattggagagtccacgcattgag
ataacggcttacgggcagttccccgaggatgaggtagaggagaacagcgttcccgtggcc
aagcgagtcaattccatagtgacattaacattgccaagtatcgacggttatcgtgatccc
acctgtctcagcccggcaagcagcgtgtcttctcgtagctgccattcagatgcatcgtca
tacgaatcgggcttctcgtacaactacgacaactcgccgcagaactcgccctggcagtct
ccatgcgtctccccgaaaggttcctcatcgctgcagtcctgcaccctcggggcttctccg
cgccattcaccctccggttctccccgtgccagtatcacagacgacaactggattggcacc
agaggctctcgaccaaattctccttgtggcggtaaacggaagtacagctttaatggcgtc
cactcgcagaagtaccatccgtactcgccgaatcaatccccggggccatcgccacaaact
tcaccccgtctcagtgtgactgaggacacctggctcgccaacaccaatcaatacaccaac
tctgccattgtcgccgccattaatgccctcaccacagatggattaacagatattggggag
gggatccctttgaagtcccgcaagaccagtctggagcacagtgcctcgatgaacctgaaa
gtagaaccaggtggagaggagacaggatccctggagctttgccaggatgacttctcagca
cgcctgcccttcaaaaaagagacctactgtagtggtttcttggatgtaccccaacaccca
tactggtccaagccgaagccttacatcagtccatcgttgcctgctcttgattggcagttg
ccttccagttcagggccgtatagcctacagattgatgtccaacccaagtcccatcaccgt
gctcattatgagactgaaggcagcagaggggccgtgaaagcactagcgggagggcatcca
gtggttcagcttcacggctacatggagagtgagcctttgaccctacagctgttcattggg
acggcagacgaccgtcttctccggcctcacgccttctaccaggtccaccgtataaccggg
aagaccgtgtccacaccaagccacgaggtcatgcagtccaacaccaaagttcttgagatt
cctctcctgcccgagagcaacatgagggccataatcgactgcgctggaattctcaagctg
cgtaactcagacatcgagctccggaagggcgagacagacatcggacggaagaacacgcgt
gtgaggatggtgttccgtgtccacatcaaccaacctaatggcaggatggtgtccttacag
gtggcatctaaccccattgagtgctcccagcgctcggcacaggagctgcccctcgtggat
aaacagagcatggaaagctgtgccgcctcagggggggaacagatgcttctcagcgggcac
aacttccaacccgactccaaggtggtgtttgtggagagagcacaagatggccatcacatt
tgggaaatggaggccaaagtcaacagagaatcctttaaatctgtggctttgcttgtggaa
gtcccatcatatcggaaccaaagaatatccaacccagttcaagtgaatttctacgtgtgc
aatggcaaacggaagagaagccagtaccagcgtttcacatacctgcccacaaacgttcca
accataaaaacagagccgcgcgacgactacgacctcccccaggtatgtgcgccgctccat
cctgttgggttggcactgcatccgaagccctactacagccccccggcgatgacccccatg
ataccctcagaactaaggccctgtgtgacgggctcattcgcgtcgagccctcagagactt
gctgcaaagcccacctccctgtcctgctcgtcctcccccagcaccagcccaaaactgcag
gatctttccccgcctcacatctccactaagtgcctatcagtgggattgaacttgggctcc
cagtctcctacggtcccacacgtctctaccattcagcccacacccggacgctaccctcag
tccatgctctacccaacaggaagcgctgcatcctctccagggtcccatccttccacccca
aactctgcaccagaactccccttcactcccagcctcaatctgacccaatcacaggccacc
agtgaggcctctgcgttagcggctcacataaccaaaggaccagtgaggagcgggtcctcc
cccctcctacaggaggaggaagacgcccccgccatgctggctgtcagcatcaagcaggaa
ccacaggaactggatcaaatgtacctagatgatgtaaatgaaatcatcaggaacgatctc
tccagcatctccgtgcacagccacgcatag
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