Squalius cephalus (European chub): 307163433
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Entry
307163433 CDS
T11930
Symbol
c1galt1a
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00512
Mucin type O-glycan biosynthesis
scep00514
Other types of O-glycan biosynthesis
scep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
307163433 (c1galt1a)
00514 Other types of O-glycan biosynthesis
307163433 (c1galt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scep01003
]
307163433 (c1galt1a)
Enzymes [BR:
scep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
307163433 (c1galt1a)
Glycosyltransferases [BR:
scep01003
]
Glycan extension
Type 3 chain
307163433 (c1galt1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
307163433
NCBI-ProteinID:
XP_079735590
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All DBs
Position
8:<14262221..>14268773
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AA seq
311 aa
AA seq
DB search
MRLFKHCILFLSGVAVSLLLSITYSRVLRTLTPTFAMHARNTYTVWHTAENRRATDLSQK
VRVLCWVMTQPQHLESRTQHVRDTWGKRCNIILYMSSKESDFPTVGLNVSEGRSQLYWKT
IRAFQHIHKHHLDDADWFLKADDDTFVVLENLRYGLSKHNTEEPLYFGRRFAPFVKQGYM
SGGAGYVLSKEALRRFVKGFADGLCTHNTDLEDKGLGQCMETMKVRTGDSRDVLKRQTFH
PYPPDYYLPRQLPRRRPWYLLYEHYNPVEGPGCCSDLAISFHYTDAVGMHTLEYYTYHLR
PYGYKYRFNPD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagattatttaagcactgcattttatttttaagtggcgtagcagtaagtctgcttctc
tcaataacttattcacgtgttctaaggactctgacacctacatttgccatgcatgcaagg
aatacatatactgtatggcacacagccgagaacagaagagccacagaccttagccagaag
gtcagagtgttatgctgggtaatgacgcagcctcaacacctggaatctagaacccaacat
gtgcgtgacacatggggcaaacgctgcaacatcattctgtacatgagctcgaaggagtca
gacttcccaacggtagggctcaacgtgtcagagggacgcagtcaactctactggaagacc
atacgggccttccagcacattcacaagcaccatctggatgatgctgattggttcctcaaa
gctgacgatgacacgtttgttgtccttgagaatttgcgctacggtctgtccaagcacaac
acagaggagccgctgtattttgggcgtaggttcgcaccattcgttaaacagggctacatg
agcggaggggctggttatgtcctcagtaaggaagctttgaggagatttgtgaagggtttt
gctgatggactttgcacacacaacacagaccttgaggataaaggattgggacaatgcatg
gagacaatgaaagttaggacaggtgattccagagacgtgttgaagagacaaacctttcac
ccttaccctccagactattacctgcccagacagctacccagacgacgaccctggtacctc
ctctatgagcattacaaccctgttgagggccctggatgctgttcagatttagccatctct
ttccactacacagatgcagtgggaatgcacacactagagtactacacctaccacttacgc
ccatatggatataaatacagatttaacccagattaa
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