Squalius cephalus (European chub): 307164119 Help Entry 307164119         CDS       T11930                                  Symbol itga6a Name (RefSeq) integrin alpha-6 isoform 1   KO K06485   integrin alpha 6 Organism scep  Squalius cephalus (European chub) Pathway scep04382   Cornified envelope formation scep04510   Focal adhesion scep04512   ECM-receptor interaction scep04514   Cell adhesion molecule (CAM) interaction scep04518   Integrin signaling scep04810   Regulation of actin cytoskeleton scep04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:scep00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     307164119 (itga6a)    04514 Cell adhesion molecule (CAM) interaction     307164119 (itga6a)    04518 Integrin signaling     307164119 (itga6a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     307164119 (itga6a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     307164119 (itga6a)    04810 Regulation of actin cytoskeleton     307164119 (itga6a)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     307164119 (itga6a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:scep04147]     307164119 (itga6a)    04515 Cell adhesion molecules [BR:scep04515]     307164119 (itga6a)    04090 CD molecules [BR:scep04090]     307164119 (itga6a) Exosome [BR:scep04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    307164119 (itga6a)   Exosomal proteins of breast milk    307164119 (itga6a) Cell adhesion molecules [BR:scep04515]  Integrins   Integrin alpha subunits    307164119 (itga6a) CD molecules [BR:scep04090]  Proteins   307164119 (itga6a) SSDB OrthologParalogGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha VERL_C Motif Other DBs NCBI-GeneID:  307164119 NCBI-ProteinID:  XP_079736676 LinkDB All DBs Position 9:complement(34420662..34452016) Genome browser AA seq 1093 aa AA seqDB search MELFEEGLSLNLCIFSLLIWTSTSAFNLDTQNVLRKNGHPGSLFGFSLALHRQLQPSDKT ILLIGAPTARALSNQGANITGGLYSCDITTHPDDCTRVDFDNDVDVLVENKENQWMGVTV QSQGPGGKIVTCAHRYQRLLFPNTPQEARDITGRCYMLSQDLSIDSQSDEDGGNWKFCDG RPRGHERFGACQQGLAATFTKDYHYVIFGAPGAYNWKGVVRVEQKNNTLLEMGLFDDGPY EVGDENRLDPSLVPVPANSYLGFSLDSGHSITEKGKLIIVSGAPRANHSGAVVFLRKQEE ASTMLMSEHILEGPGLASSFGYDVAVVDLNGDGWQDVVVGAPQFYQRDEEVGGAVYVYIN KAGRWKDVTPTRLNGTKDSMFGLAVENIGDINLDSFEDIAVGAPYADSGFGSVYIYHGSA DGINTKPAQILEGKQHNIKMFGYSLAGNMDLDQNSYPDLAVGSLSDTVFIYRSKAVISIK QDIKVTPKEIDLMKKTCGNSICLTVEACFTYRANPHTYNPKITISCTLEAEWHRRKLGLP SRVVFLEKNEMDQDFQSTSTLELRGQNKKACYKTELRLQEGIRDKLRAIPIEVSVAIQSA KRGKRQSSLPQLVPILDSSVPNKTITEVNFLKEGCGTDNICQSNLHLQYRFCYRESKQDV FPPLPLENGVPVISLSDQKDIALEVTVRNRNGDDAHEAKLVGQFDESLSYSGFRSLRTTD KHVICAANQNGSLADCELGNPFKRDSEVKFYIILSTGKISLDTKEVEIDLQLETTSSQEG LSKVKAKAKVVIELLLSVQGVAKPSQVYFGGRIRGMSAMKTEEEVGSLIEYEFRVINLGK PLKSFGTASLNIQWPKESSVGKWLLYLMKINTKGLQLVTCSPEREINPLRLSEESTSTRR KRELEERRPSDGSKISLFTDKRKHKILSCSGDARCVEMKCPLQGLDSTAVIVLKSRLWNS TFLEDYASYNYLDIIVKASISLDVSANNIVLKNAETQVRLTVFPETTVTPFGGVPWWIIL VAVLAGILMLALLVLLLWKCGFFKRSKYEDSVPKYHAVRIRKETRLLKDGKVMLDPFEKK QWMTTWDENESYS NT seq 3282 nt NT seq  +upstreamnt  +downstreamnt atggagctctttgaggaggggctctctctgaacctgtgcatcttttcgttgctcatatgg acttctacaagtgcatttaacctggacacgcaaaacgtcctcaggaagaatggtcacccg ggaagcctcttcggattctccctcgccttgcaccggcagctccagccctcggataaaaca atattgttgattggtgctcccacagccagggctttgtccaatcagggagcaaacatcaca ggtgggttgtacagctgtgacatcaccacccatcccgatgactgtactcgagtggacttt gacaatgatgttgatgttcttgtggagaataaggagaaccagtggatgggtgtaacggtt cagagccaaggacctggaggcaagattgtgacatgtgcccatcgctaccagcgcctgttg ttcccgaacacaccccaggaggctcgtgacatcactggacgctgctacatgctcagtcaa gacctgagcatcgacagccaatcagacgaggatggggggaactggaagttctgtgacggg cgccctcggggtcatgaacgattcggcgcctgtcagcaaggcttggctgccaccttcact aaagactaccattatgtcatctttggagcgccaggggcgtacaactggaaaggtgtagtg cgcgtcgagcagaagaacaacactctgctggaaatgggcttgtttgatgatggtccttat gaggtcggggatgaaaaccgccttgatccaagtctagtgccagtaccagccaacagttac ttaggattctctctggattccggccacagtatcacagaaaaagggaaactcatcatcgtg tccggagcgccgagagccaatcacagcggtgcagtggtgtttctgcgcaagcaagaagaa gcctccaccatgctcatgtctgaacacattctggaaggaccaggactcgcgtcgtcgttt ggatatgatgttgctgtggtggacctaaatggagatggttggcaagatgttgtggttggt gcaccccagttctaccagagagacgaggaggtgggtggagctgtgtacgtttacatcaat aaagctggaaggtggaaggacgtcactccgactcgcctgaatgggaccaaagactccatg tttggactggctgtggagaacattggagacatcaatctggattcttttgaagatattgca gtaggagctccatatgcagactcagggtttggtagtgtgtacatctaccacgggtctgct gacggcatcaataccaaaccagctcagatactggagggcaaacagcacaatattaagatg tttggctattctctggctggaaatatggacctggatcagaactcgtaccctgatctcgcc gttgggtcgctctctgacacagtttttatttacaggtccaaagcggttattagcatcaag caagacatcaaggtgacaccgaaggaaattgacttgatgaagaaaacgtgtggcaacagt atttgcttgactgtggaagcttgtttcacatatagagcaaaccctcacacctacaaccct aagatcaccatttcctgtacattggaggcagagtggcaccgcaggaagctgggtctccca tctagagttgtgtttctggagaagaacgagatggatcaggacttccagtcgaccagcact ctggagctacgaggacaaaacaaaaaagcttgttacaagaccgaactcagattacaagaa ggcatcagggataagctcagagcgattcctatcgaggtgtctgtggccattcagagtgct aagagaggcaaacggcagagctcgctgccacaactagtgccaatactggactcctctgtg cccaacaagaccatcactgaggtgaacttcctgaaggagggttgtggcacggacaacatc tgtcagagtaacctacatctgcagtacaggttctgctacagggagtccaaacaagatgtg ttccctcctctacctctggagaatggtgtgccggtgatttctctgagtgatcagaaggac attgctctggaggtcacagtgaggaacagaaatggagatgatgctcatgaagccaaattg gtggggcagtttgatgaatctctctcatactctggattcagatctctgagaactactgat aaacatgtgatctgtgctgccaatcagaatggctctctggcagactgtgagctgggaaac ccttttaaacgggattcagaggtaaaattctatatcatattgagcactggcaagatatca ctcgacaccaaagaagttgagatcgaccttcagctggaaacaacaagttcacaggagggc ctgagcaaagtgaaggccaaagccaaagtggtgattgaacttcttctttctgtacaaggg gttgccaagccatctcaggtctattttggaggtcgaatcagaggcatgagtgccatgaag acagaggaggaagtcggcagcttgatcgaatatgaattcagagtgattaatttgggaaag cctctgaagtcttttggcactgcatccctaaacatccagtggcctaaagaaagttctgtg ggaaaatggctgctgtatctgatgaagatcaacaccaagggcctgcagttagtcacctgt tcacctgagagagagataaaccctctcagactgagtgaggagtcgacgtcaaccaggaga aagcgtgagctggaggagaggagaccatctgacgggagtaaaatatccctcttcactgac aaacgcaagcacaagattctgtcatgcagtggcgatgccagatgtgtggagatgaaatgc ccccttcagggcttggacagcactgcagtcatcgttttaaaatcccggctgtggaattcc actttccttgaagattatgcgtcctacaattaccttgatataatagtgaaagcctccata agtctggatgtctccgccaataacattgtccttaaaaatgccgagacccaggtgaggctg accgtgttcccagagacgacagtgactccgttcggaggagttccctggtggatcattctt gtggcggttttagctgggattctgatgctggctctcctagttctgttactctggaagtgt ggatttttcaaacgttccaaatatgaggacagcgttccgaaatatcatgctgtgaggatt cgtaaggagacacgtctcttgaaagacggaaaggtcatgttagatccctttgagaagaag caatggatgaccacatgggatgagaacgagagctactcatga

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