Squalius cephalus (European chub): 307164249
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Entry
307164249 CDS
T11930
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a
KO
K15188
cyclin T
Organism
scep Squalius cephalus (European chub)
Pathway
scep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
307164249 (ccnt2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scep03021
]
307164249 (ccnt2a)
Transcription machinery [BR:
scep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
307164249 (ccnt2a)
Brd4/P-TEFb complex
307164249 (ccnt2a)
7SK RNP complex
307164249 (ccnt2a)
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Paralog
GFIT
Other DBs
NCBI-GeneID:
307164249
NCBI-ProteinID:
XP_079736957
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Position
9:20133450..20141944
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AA seq
702 aa
AA seq
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MAACRGSSSKWFFTREQLETTPSRRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNTISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNLVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKSDGQGSDSSSLAGPSLTQDLSLMDALPGVSTNT
AFSKASTSFPVTLPGNSSSSLSLDSIASMQGTSYTYTAPSDWPQDQVRSDLYSVKQLPPH
TSMHPHRPDKSTEINPAKHEHKASGGAKHQATTYPPPAAPTQKMSLDKYREKHAAELAVQ
KRRQEQQSVETEVYVAPTQTDYRKHLPQLSHGQQGAGVTTASPLKMKLPVPGQDKLLDKR
EKGSSLKLRLPVPSQTEKGGSSKEELKMKIKVSSERHSSSDEGAAKSKHSSPLVSKEKHR
DHSAHRHHHKHGHSHTHTHSGNGRSVLEAPAASSALRSPLGPVADGASSASSSSRKRVNP
DASHNHHSKKNKSSKGGAGSSSHCSSVQLCVSSHNSVLNLPFPPPVTYQVGYGHLNTLVK
LDRKPVESHGLEGVGLANGQHTDYKDTFDMLDSLFSAQGMDS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccggggatcatcgtccaaatggtttttcacccgggagcagctcgaaacc
accccgtcccgtcgctgcggagtggagccagacagagagctgtcctatcgacagcaagcc
gcgaatcttattcaggacatgggccagagactaaatgtttctcaactcacaataaatact
gccattgtttacatgcacagattttatatgtaccactctttcaccaaattccacagaaat
accatctccccaacaactttatttctggctgcaaaagttgaagagcaaccacggaaactc
gaacatgtcattaaagtagcgcatgcgtgtttaaacccacaagagcctccactggataca
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggctttgaaataacaattgaacatccacacactgatgttgtgaaatgttcc
cagctagtccgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctgcacctcaccaccttctgcttgcagtacaagcccacagtcatcgcctgtgtttgcatt
cacctggcttgcaagtggtccaactgggagatccccgtttccactgatggaaagcactgg
tgggagtatgtggacaacttagttacacttgaacttcttgatgaactgacccacgagttt
ctgcagattctggagaagacacctagcaggttaaagaggattcgtaactggagggctaca
caagcggctaagaagcccaaatcagatggtcagggctcagatagcagctctttagcggga
ccctcgttaacacaggacctgtccttgatggatgcccttcctggggtctctacaaataca
gcattctccaaagcctccacgtctttcccagtgaccctgccgggcaactcaagcagcagt
ctttctcttgattctattgccagcatgcagggaacctcttatacttacaccgcccccagt
gactggcctcaggaccaagtacgctcagacctgtattctgtcaaacaacttcctccacac
acatctatgcacccacatcggcctgacaaaagtacagagatcaaccctgccaaacatgaa
cacaaggccagtggtggtgccaagcaccaggcaacaacctatcctccacctgcagccccc
acacagaaaatgtctctggacaagtacagggagaaacacgctgctgaactggcggtgcag
aaacgcaggcaagagcagcagagtgtggagactgaggtctatgttgctccaacacagaca
gattaccgcaaacatttaccccaactgtctcatgggcagcagggagcaggagtcaccact
gcctcgcccctgaagatgaaactgcctgtccctgggcaggacaagctcctggacaaacgc
gagaaaggcagctctttaaaactgcgtcttccagtcccctcccaaaccgagaaaggcgga
tcaagtaaggaggagctaaaaatgaaaataaaggtgtcctctgagcggcatagctcctca
gacgagggtgctgcaaagagcaaacattccagcccgcttgtgagcaaggagaaacacaga
gaccactcagcccatcgtcaccatcacaaacacggccactcgcacacacacacacatagc
ggcaatggcaggagcgtcctagaggcacccgcagctagttcggcccttaggagcccatta
ggtcctgttgctgatggtgcgagctcagcttccagttcctcacgcaagagggtgaacccc
gacgccagccacaatcaccactccaaaaagaacaaaagctccaaaggcggtgcaggtagt
tcctctcattgttcatctgttcagctgtgtgtgtcatctcacaactctgttcttaacctt
cccttccccccccccgtcacataccaggtgggctacggacatctcaacaccctagtgaaa
ctggacaggaaaccagtggagagccatggccttgagggcgtcggcctagctaatggccaa
cacacagactacaaagatacttttgacatgcttgattcgctgtttagtgcccaaggaatg
gactcttga
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