Squalius cephalus (European chub): 307164327
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Entry
307164327 CDS
T11930
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform 1
KO
K17902
TBC1 domain family member 4
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
307164327 (tbc1d4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307164327 (tbc1d4)
Membrane trafficking [BR:
scep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
307164327 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
307164327 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
307164327 (tbc1d4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
PTB
DUF7307
Motif
Other DBs
NCBI-GeneID:
307164327
NCBI-ProteinID:
XP_079737163
LinkDB
All DBs
Position
9:complement(15317062..15350279)
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AA seq
1249 aa
AA seq
DB search
MEGQDGKGNNNNDSNQKADKRFALCYMGWSSLDRRTTLPMLPWLVAEIRRKSEKNESGPA
QAREVQLNLSPSLIRCVPANSSNPSVFIFEHKAQFISRFIHNSHDLSYFAYLIRSQPENP
ESEMACHVFKACDPNQVPEVISSIRQVSKAALKEESKPKQDSDESFYNSQKFEVLYCGKV
TVNHKKAPSTLIDDCIDKFRQHEIERKRLRLLSGQRSSTEAPVEFIMGDDPLSSSLCEVD
EPEAEPGSIEEDLSELANGKLALTSSSSTGSLRGALPECILEDSGFGEQQEIRTRCNSLA
GGLQKKPRETGKGSTRRRHASAPNNVQPTDADKNRTMLFQVGRFEVNLISPETKTVVLEK
NFKEISSCSQGVKQTDHFGFICRDVEESGPAQYVCYVFQCASESLVDEVMLTLKQAFTTA
AAMQSSKNQIKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLSDNEQVNIFERVQ
KMKPASDHEENELVILHLRQLCETKQKSHVHIGEVSQQNASGSTLTSDNSSAGRNKLDLL
KNKARSSLTSSLENIISRGANRMRMRLGSMGSFDRGDSPGDSPPGTPPSYLEDDPDAPQF
RRRAHTFSHTPIKKKISFTEGSSQACKAPLRRQQSLAPELLQSSSIGISRVRSVSESDSH
FSLSSSFHTPTFLKSFYQGSLGSLASLSDNGSLKSGNGEGRKRSLSGCSTDSLTLLPPRR
VSWRQKIFLRVASPMNKPSASMQNVDHMDGRELLPLSPRALNLDQDPQASPLSPEQGFGG
EKGRRCPADYRALWKKAIHQQILLIRMEKENQRLEASRDELHIRKMKLDYQEVCQCSKDL
QALWDRKLSSPCRTKVQWDKEEINSAVCQGVPKSRRGEVWLLLFQQYRLRHRLPQRQQSP
ETPYQDLLKQLTAQQHSILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLLDTEVGYC
QGISFVAGLLLLHMSEEQAFDTLKFLMYDLGIRRQYRPDMISLQIQMYQLSRLLHDYHRN
LYTHLEEHEICPSLYAAPWFLTLFASQFPLGFVARIFDLLFVQGTEVIFKVALCLLSNHE
GEILECDSFESIVDYLKSTIPTLTHSQMEETITKATEMDISKQLHAYEVEYHVLQDELSD
APPPSEESDRLDKLEKSNAQLKKQNMDLLEKLQAARLKIQTLESSVESFLSRESKMKHLI
RSLEQEKASYQKTIERMRSSLPSEAMAEVEMTQLKSSNNGKAKAACKKP
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggagggacaggatggcaaagggaataataataatgacagtaatcaaaaggcagacaag
aggtttgcgctgtgttacatgggctggtcgtctctggacaggcgaaccacgctgcccatg
ctcccgtggctggtggcggagatccggaggaaaagtgagaagaacgagtccggtcccgca
caggccagggaagttcagctgaatctctcgccctctctgatccgctgcgtgcccgcaaac
agcagcaacccgtccgtgttcatattcgaacacaaagcacagtttatatccaggtttatc
cacaatagtcatgacctgtcttattttgcctaccttatccgaagtcaaccagagaaccca
gagtctgagatggcatgccatgtgttcaaagcatgcgatccaaatcaggtgcctgaggtt
attagcagcattagacaggtgtccaaggctgcacttaaggaggaaagcaagcccaagcaa
gatagtgacgagtctttctacaactcccagaagtttgaagtactttactgtggaaaagtg
actgtcaaccacaagaaagccccttcaactctaattgacgactgcattgataaattccgc
caacacgagattgaacgcaagcgtctgcggctcctcagcggacagcgtagctccaccgaa
gcccccgtagagttcatcatgggtgacgaccctctaagctcctcgctctgcgaagttgac
gaacccgaggcagaacccggctcgattgaggaagacctgtctgagttggccaatgggaaa
ctggccttgaccagctcctccagtacaggcagcttgcgaggggctcttcctgagtgcatt
ttggaggactctggatttggggagcagcaggagattcgtacgcggtgtaatagcctcgcg
ggcggcctgcagaaaaagcccagagagactggcaaggggtcaacgcgtaggagacatgct
agcgcgcccaataatgtgcagccgactgatgctgacaagaatcgcacaatgctgttccag
gttggacggtttgaagtgaatctcatcagccctgaaaccaaaactgtggttctggagaag
aattttaaggaaatctcgtcatgttcacagggtgttaaacagacagatcactttggcttt
atttgtcgggatgtggaggagtctggcccagcccagtatgtgtgttacgtgttccagtgc
gctagtgagtccctggtggatgaagtaatgctcaccctaaaacaagcctttaccacagca
gcagctatgcagagctccaagaaccaaatcaaactgtgcgaggcttgtccaatgcacgac
ttgcacaagctctgtgagagaatagaaggcttgtatcctcccagggcgaaactagccatt
cagaagtacctgtcccaactgagcgacaacgagcaggtcaacatattcgaacgggtgcag
aaaatgaagccagcatctgatcacgaagaaaacgagcttgtgattcttcacctccgacag
ttgtgtgagaccaagcagaaatctcatgttcatattggagaggtctcacagcagaatgcc
tctggcagcactctgacctctgataactccagtgcgggccgcaataaactggacttgttg
aagaacaaagcccggagttctttgacgagctccctggagaacatcatctcacggggagcc
aaccggatgcgaatgcgcctgggcagcatgggaagctttgaccgcggcgactctcctggt
gactccccacctgggactccacccagttaccttgaggacgacccagatgccccgcaattc
cgtcgccgggcacacaccttcagccacacgcccatcaagaagaagatctccttcactgag
ggttcctcccaggcctgtaaggctccactgcgccggcagcagtctttggccccagagctg
ctgcagagcagcagtattggtatctcaagagtgcgcagtgtctctgagagtgactcccac
ttcagtctctcatcctccttccacacccccactttcctgaaaagcttttaccagggctcc
cttggctcactggcctccctgtcggacaacgggagtcttaagagtggtaatggggagggc
aggaagaggtctctgtcaggctgtagcaccgattctttgaccttgctgcctccacgcaga
gtttcttggcgccagaagattttcctgagggtggcgtcacccatgaacaaaccctccgct
tctatgcaaaacgtggaccacatggatggccgggagctgctgccactttctcctcgggct
ttgaacctggatcaagaccctcaggccagccctctgtccccagagcagggctttggtgga
gagaagggccggcgctgcccagctgactacagggccctgtggaagaaagccatccaccaa
cagattttgctcatccgcatggagaaagagaaccagcgcctggaggccagccgtgatgaa
ttgcacattcgtaaaatgaagctggactaccaggaagtgtgtcagtgctccaaagatttg
caagccctgtgggacaggaagttgagcagcccctgccgcactaaagtacaatgggacaaa
gaagagatcaacagtgccgtctgccagggtgtccccaaaagtcggcgaggtgaggtgtgg
ctcctcctcttccagcagtatcgtctgcgtcaccgtctgccgcagcggcagcagtctcct
gaaacgccttatcaagatctcctcaagcagctcacagcacagcaacactccatcctggtc
gacctcggccggacattcccaacgcaccagtatttcagtgctcagctgggagctggacag
ctgtctctgtacaatctcctgaaggcctactccctgctggacacggaggtgggctactgc
cagggcatcagttttgtggccggtttgctactgttgcatatgagcgaggaacaggctttc
gacaccctcaagttcctcatgtacgatctgggcattcgccggcagtaccgtcccgacatg
atctccctgcagatccagatgtaccagctgtcccgtctgctgcatgactatcaccgtaac
ctgtacactcacctggaggagcacgagatctgccccagcctgtacgccgcaccgtggttc
ctcactctcttcgcctctcagttcccgctcggctttgttgcccgtatatttgacctcctg
tttgtccaaggcacagaagtgatctttaaggtggccctgtgtttgctgagcaaccacgaa
ggggagatactggagtgtgacagctttgaaagtatcgtggactaccttaaatccaccatc
cccaccctcactcacagccaaatggaagagacaatcaccaaggcgactgagatggacatc
tccaagcagctgcacgcgtatgaagtggagtaccacgtcctgcaggatgagctgtcagac
gcacctccgccatcagaggaatctgataggctggataaactggagaaatccaatgcccag
ctcaagaaacagaacatggacttgctagagaaactgcaggcggctcgtttgaagattcag
acattggagagcagcgtggagagtttcctgtcacgagagagcaagatgaagcacctgatc
cgttctctggaacaggagaaagcttcctaccagaagaccattgagcgcatgcgtagcagt
ttgccatcagaagccatggctgaggtggagatgacacaactcaagtccagcaataatggg
aaagccaaagctgcctgtaaaaagccttga
DBGET
integrated database retrieval system
