Squalius cephalus (European chub): 307164348
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Entry
307164348 CDS
T11930
Symbol
wars2
Name
(RefSeq) tryptophan--tRNA ligase, mitochondrial
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
307164348 (wars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scep01007
]
307164348 (wars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scep03016
]
307164348 (wars2)
Enzymes [BR:
scep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
307164348 (wars2)
Amino acid related enzymes [BR:
scep01007
]
Aminoacyl-tRNA synthetase
Class I (G)
307164348 (wars2)
Transfer RNA biogenesis [BR:
scep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
307164348 (wars2)
Prokaryotic type
307164348 (wars2)
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GFIT
Motif
Pfam:
tRNA-synt_1b
AAA_SpoVK_2nd
HI_1622_C
DUF3718
Motif
Other DBs
NCBI-GeneID:
307164348
NCBI-ProteinID:
XP_079737265
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All DBs
Position
9:21515366..21531535
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AA seq
367 aa
AA seq
DB search
MALSVKCNMKSLFRFIHTSNSHRRLFKAGKATGTMSLPKGQVFSGIQPTGVPHLGNYLGA
LENWVALQDEYSTVMYSIVDLHSITQPQDPQILRDNILDMAASLLACGIDPTRSILFQQS
QVAEHAELAWILGCLTSMPRLRHLPQWKMKSMEKNEGSVGLYTYPVLQAADILLYKSTHV
PVGEDQIQHLELAQDLARIFNNQYGEFFPEPRALLSVTRKVKSLRDPSSKMSKSDPQKLS
TVFLNDTPDDIALKIRRAVTDLTSEVTYEPESRPGVSNLVSMHAAVSGQSVEEVVRLAKG
MDTGQYKNVVAEAVVEKLQPIRLEIQRLRADRGHLESLLAKGAEKARSLAVPVMTEVRKL
VGFYYGN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccgtgaagtgtaacatgaaatctctgtttcgttttattcacacaagtaat
tcccatcgaagattatttaaagctgggaaagcgacgggaacaatgagcctccctaaaggg
caggttttctcaggaatccagcccacaggtgttcctcacttggggaactatctaggagct
ctagagaactgggtggccctgcaggacgagtacagcacagtcatgtacagcatcgtagac
cttcattccatcacccagcctcaggaccctcagatactgcgagacaacatcctggacatg
gccgctagtctgttggcctgtggcattgacccgactcgctccatcctctttcagcagtct
caagtcgctgaacatgctgagctcgcatggatcctaggttgccttaccagcatgccacgt
ttacggcacctgcctcaatggaagatgaagagcatggagaagaatgaaggcagtgtgggg
ctttatacgtacccggtgttacaagcagcggatattctgctttacaaatccacacatgtg
ccagtaggggaggaccagatccagcacttggagctcgcccaggacttggcccgcatcttt
aacaaccagtatggagagttcttccccgagcctcgtgccctgctcagtgtcactcgaaag
gtgaaatctctcagggatccatcttctaagatgtccaagtcagacccccaaaagttatct
acagtcttcctgaacgatacacctgatgacattgcccttaagattcgcagagctgtgact
gacttgacttctgaagtgacctatgagcctgagagccggccaggtgtatcaaacctagtc
tccatgcacgcggctgtgtctggacagagcgtggaggaggtggttcggctggctaaaggt
atggacactggacagtacaagaatgtggtcgccgaggctgttgtagaaaagctgcaaccc
attcgtctggagatccaaagactgagggccgacagaggccatcttgagagtctgttagcc
aaaggagcagagaaggctcgcagcctggcggttcctgtgatgacggaagtcaggaaacta
gtgggcttttattatggcaattga
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