Squalius cephalus (European chub): 307164753
Help
Entry
307164753 CDS
T11930
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307164753 (sox21b)
Transcription factors [BR:
scep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
307164753 (sox21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
VirB4_TrbE_N
Motif
Other DBs
NCBI-GeneID:
307164753
NCBI-ProteinID:
XP_079737938
LinkDB
All DBs
Position
9:220810..222763
Genome browser
AA seq
221 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPMAYNLGEHEALKVSAHPGGVPESLM
SNAEKARVFFNPAMANPYSFFDLGSKMPELSPPFSYASPLGYPSAGTAFSGAHAHSHPSP
GNPGYMMPCTCSAWPPAGLQPPLAYILLPGLGKPGLDPYPL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcccatggatcacgtgaagcgccctatgaacgcgttcatggtgtggtcccgc
gcgcagagacggaaaatggcccaagaaaacccgaaaatgcacaactctgagatcagcaag
agactgggcgcggagtggaaactcctgacggaagccgagaagcggccgttcatcgacgag
gcgaagcggctgcgcgcgatgcacatgaaggaacaccccgactacaagtacagacccaga
cgaaagcccaagactttaatgaagaaggacaagttcgcgttcccgatggcgtataacctg
ggagagcacgaggcgctgaaggtgagcgcgcacccgggcggcgtgcccgagtctctgatg
agcaacgcggagaaagcgcgtgtgttcttcaacccggccatggccaacccgtactcgttc
ttcgacctcgggtccaaaatgcccgaactctccccgccgttctcctacgcgtctccgctg
ggctacccgagcgcgggcacggcgttctccggggctcacgcgcactcgcacccgtcaccg
gggaacccggggtacatgatgccgtgcacctgctccgcgtggccgcccgcgggtctccag
cccccgctcgcctatatactcctgcccgggctgggcaagccgggcctggacccgtacccg
ctatga
DBGET
integrated database retrieval system
