Squalius cephalus (European chub): 307165313
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Entry
307165313 CDS
T11930
Symbol
gabrg3
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3 isoform 1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
scep Squalius cephalus (European chub)
Pathway
scep04080
Neuroactive ligand-receptor interaction
scep04082
Neuroactive ligand signaling
scep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307165313 (gabrg3)
04082 Neuroactive ligand signaling
307165313 (gabrg3)
04519 Cadherin signaling
307165313 (gabrg3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307165313 (gabrg3)
Ion channels [BR:
scep04040
]
Ligand-gated channels
GABA-A
307165313 (gabrg3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
307165313
NCBI-ProteinID:
XP_079738937
LinkDB
All DBs
Position
10:11671300..11790750
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AA seq
465 aa
AA seq
DB search
MSTKLFLYFLLLSVFRACFQTAASEDDEYDDVTVNQMLAPKTHETDATQILNNLLKEYDK
KLRPDIGGVLKNTFDLSLVSTSFVVVKPTVIDVDIFVNSIGPVSSINMEYQIDIIFAQTW
TDSRLRYNSTMKILTLNSNMVGLIWLPDTIFRNSKSADSHWITTPNQLLRIWNDGKILYT
LRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPRDEMIYKWRRNSVQAADQKSWRLYQFD
FMGLRNTTDIIKTTAGDYVVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDAT
PARTALGITTVLTMTTLSTVARTSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSY
SAGKPTCKKTKRSNYSVLAVGPPPTVITLNNSMYWQEFDDACVYECLDGKDCQSFFCCYE
ECKDGAWRKGRLHIDILELDAYSRVFFPTSFLLFNIVYWVGYLYL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaattgttcctctacttcttacttctgtcagtgtttcgtgcatgttttcaa
acagccgcttctgaggatgatgagtatgacgacgttactgtgaatcaaatgttggccccc
aaaacccacgagacagacgcaacgcaaatactaaacaacttactaaaggagtatgacaaa
aaactacggccggatattggaggagttttgaaaaacaccttcgatctatcattggtcagt
accagttttgtagtagttaaaccgacagtcattgatgttgatatcttcgtaaatagtatt
ggacctgtgtcatcaataaatatggagtaccagattgacataatttttgcacagacatgg
acagacagccggctcagatataacagcactatgaaaatattgactttgaacagtaatatg
gttggactcatttggctaccggacaccatcttcagaaattccaagagcgcagattcacat
tggattactacaccaaatcagctacttagaatatggaatgatgggaaaatactttacact
ttgagattgaccataaacgcagaatgccagcttcaactgcataactttcctatggatgag
cactcctgcccactcatcttctccagctatggatacccacgagatgaaatgatttacaag
tggaggaggaactcagtgcaggcggctgatcagaagtcatggagactttaccagttcgac
ttcatgggcctgaggaacaccacagatataattaagacaactgcaggtgactatgtggtg
atgactgtatactttgacctaagcagaagaatgggatacttcacaattcagacctatatc
ccctgcatacttactgtggtgctctcttgggtctccttttggataaaaaaagatgcaact
ccagccagaacagcactaggaataacaacagtattaaccatgacaacgctcagcacagtg
gcacggacatcactacccagggtctcatacgtcacagcaatggacctttttgtcactgtc
tgtttcctgtttgtttttgcggctctcatggagtatgccacgctcaattattactcctac
agtgctggcaaaccaacctgcaaaaagacaaaaagatcgaactactcagtactggctgtg
ggtcctcctcccacagttatcacgctcaacaactccatgtactggcaggagtttgatgat
gcctgtgtttatgagtgcctggatggaaaagactgccagagtttcttctgctgctacgaa
gagtgcaaagatggagcgtggcgaaagggccgtctgcatatagacattttggaactcgat
gcatactctcgtgtctttttccccacctctttcctactgttcaatattgtctactgggta
ggctacttatatctttag
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