Squalius cephalus (European chub): 307165346
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Entry
307165346 CDS
T11930
Symbol
atg9a
Name
(RefSeq) autophagy-related protein 9A
KO
K17907
autophagy-related protein 9
Organism
scep Squalius cephalus (European chub)
Pathway
scep04136
Autophagy - other
scep04137
Mitophagy - animal
scep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
307165346 (atg9a)
04136 Autophagy - other
307165346 (atg9a)
04137 Mitophagy - animal
307165346 (atg9a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307165346 (atg9a)
03029 Mitochondrial biogenesis [BR:
scep03029
]
307165346 (atg9a)
Membrane trafficking [BR:
scep04131
]
Autophagy
Autophagosome formation proteins
ATG9 transmembrane protein
307165346 (atg9a)
Mitochondrial biogenesis [BR:
scep03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
307165346 (atg9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG9
Motif
Other DBs
NCBI-GeneID:
307165346
NCBI-ProteinID:
XP_079739019
LinkDB
All DBs
Position
10:complement(36460430..36469863)
Genome browser
AA seq
845 aa
AA seq
DB search
MAHFDTEYQRLEASYSDSPPGEENLLVHVPEGSKSPWHHIENLDLFFQRVYNLHQKNGFT
CMLLGEIFELVQLVFVVAFTVFLANCVDYDILFANKFVNHTDSSKVTLPDAFLPVDECSA
RIRDNVSVIFILIISGVFWLHRLVKFFYNICCYWEIRSFYINALKMSTADLPYFTWQEVQ
ARIVEIQKEHQICIHKKELTELDIYHRILRFKNYMVAMVNKSLLPVRFRLPLLGDTVFYT
RGLKYNFELIFFWGPGSLFENEWSLKSEYKRGGNRLELADRLSSRILWIGVANLLLCPVI
LIWQILYAFFSYTEVIKREPGSLGARCWSLYGRFYLRHFNELDHELMSRLSKGYKASSKY
MNCFMSPLLTVVAKNVAFFAGSILAVLIALTIYDEDVLAVEHVLSSITLLGVGITVCRSF
IPDKHMVFCPEQLLKVILAQIHYMPDHWQGNAHRYETRDEFAQLFQYKAVFILEELLSPV
ITPFILIFCLRRKSLEIIDFFRNFTVDVVGVGDTCSFAQMDVRQHGHPAWMSAGKTEASI
YQQAEDGKTELSLMHFAITNPHWQPPRESTHFISLLKEKVHREAAGGQQGIIAENPVFQS
THSLQSDSEPRSLIANLLIGPPSLASLHLGREGSINPVSIGVSEGASALRSLSPVSTSLH
LRGSYPSARLPRQDHPAVVTGRAMTGSGTDARTISSGSSAWEGQLTSMILSEYASTEMSI
HALYIHEMHKQQSRGELSRHTWHRQESDESSESVNEDMEAARNFPRSSTFPSATSSHQQG
AAHHSSSQRRFDGTSDPASGSFRVQRTPRMPMGGWSEENQIGRHHDPVPEEGAEDDQPPH
IHKVT
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcccactttgatacagagtaccagcgcctggaggcgtcctacagcgactcccctccc
ggagaagagaatctactggtgcatgttccagagggatccaaatctccgtggcaccacatt
gaaaatctagaccttttcttccagagagtctataatctacaccagaagaatggatttact
tgtatgctgctgggtgaaatatttgagcttgtgcaactggtgtttgtggtggcattcaca
gtgttcctggctaactgtgtggactatgacatcctttttgccaacaagtttgttaatcac
actgattcctcaaaggttacgctgcccgatgcgtttctaccagtggacgagtgcagtgct
cggatccgtgacaatgtttcggtcatcttcatccttatcatatcaggggtcttttggctc
caccgtctcgtcaagttcttctacaacatctgttgctactgggagatcagatcgttttac
attaatgccctaaaaatgtccacggcggaccttccttattttacctggcaggaggtgcag
gcaaggattgttgagatacagaaggagcaccagatttgcatccacaaaaaagaactgaca
gagcttgacatctaccatcgcatcctgcgtttcaaaaactacatggtcgctatggtcaat
aagtcacttcttcctgtgcgctttcgtttgcctctgctgggcgacactgttttttacacc
cgtggcctcaagtataactttgagctgattttcttctggggccctggatctctttttgaa
aacgagtggagtttgaagtcagagtacaaacgtggagggaaccgtttagagctagcagat
cgcctgagctcacggatcttgtggatcggagtcgccaaccttctcttgtgtccagttatc
ctgatttggcagattctctacgcgttcttcagctacactgaggtgatcaagcgtgagccg
ggaagcctgggtgctcgatgttggtctctgtatggccgtttttacctcagacacttcaat
gaactagaccatgagctgatgtcacgcctcagcaagggctacaaggcctcctcgaagtac
atgaactgcttcatgtcaccattactgacggtggtggccaagaacgtggcattcttcgct
ggctccatacttgcggttttgattgctttgactatttatgatgaagatgtattggctgtg
gagcatgtgctcagcagtatcacattacttggggtcggcatcacagtctgcaggtcattt
atcccagacaagcatatggtgttctgtccagagcagctgcttaaagtgatcctggcacag
attcactacatgcctgatcattggcagggtaatgcccaccgctatgagaccagagacgag
ttcgcacagctctttcagtacaaggctgtgtttattcttgaggagcttttgagtcctgtc
atcactcccttcattctcattttctgcttgcgccgcaaatctctggagatcatagatttt
ttccgaaactttactgtggatgtggtcggtgtgggtgatacttgctcttttgcacagatg
gatgtccgtcaacatggtcatcctgcatggatgtctgctgggaaaacagaggcctccatc
tatcagcaggcagaagacgggaagacagaactgtcactcatgcactttgcgatcacaaat
ccacactggcagccccctcgggagagcacacatttcatcagtcttctgaaagagaaggtg
caccgcgaggccgccggaggacagcagggaatcatagcagagaatcctgtctttcaatca
acccattcactacagtctgattcagagcctcgcagtcttattgcaaatctcctgatagga
cccccttccctggcctcgctgcatctgggtcgagagggctccatcaatcctgtgtccatt
ggagtgagtgagggagcttccgccctccgatccctctctccggtcagcacgagtctacac
ctccgaggcagctacccatccgccagactgccgcgacaggaccatccagctgtggtgact
gggcgagcaatgacaggctctggcactgacgcccgtaccatcagctctggcagtagtgcc
tgggaaggccagctaaccagtatgatcctatcagaatacgcctccacagagatgagcatc
catgctctctacattcatgagatgcataagcagcaatcgcgaggtgagctgtctcgacac
acctggcacagacaggagagtgacgagagcagtgagagtgtcaatgaagacatggaagct
gctcgcaacttccctcgttccagcactttccctagtgccaccagctcacaccagcagggg
gcagcacatcacagcagcagccagcgacgcttcgacggaacctcagatcctgcttctgga
agctttcgagtccagaggacacctcgtatgcctatgggcggctggtctgaggagaaccaa
ataggccggcatcacgacccagtgcccgaggagggggctgaggatgatcaaccgccacac
atccataaggtgacttaa
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