Squalius cephalus (European chub): 307165358
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Entry
307165358 CDS
T11930
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
scep Squalius cephalus (European chub)
Pathway
scep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
307165358 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scep03400
]
307165358 (rad54l)
DNA repair and recombination proteins [BR:
scep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
307165358 (rad54l)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307165358
NCBI-ProteinID:
XP_079739041
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Position
10:complement(<41339221..41357207)
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AA seq
737 aa
AA seq
DB search
MRRSLAPSQMAKRKQGPDSDDEDWEPEVASQSKRNCRENLISPFRKPLTPLTNTPVCADG
NAHEDFIRKILSKPFKVPIQNYTGPLGLRALGLKRAGVRKALHDPFEDGALVLYEPPAIS
AHELIKADKEKLPVHVVVDPVLTKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGL
GKTLQCITLMWTLLKQSPDFKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGS
KEEIDRKLENFISQHGRRVPTPILIISYETFRLHTEVLHKGKVGLVICDEGHRLKNSDNQ
TYQALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDA
DASDKDRAAGEEKLQQLISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLF
LKQSKPVESLQTGKITVSSLSSITSLKKLCNHPALIYEKCLAGEEGFDGAMDLFPQNYST
KAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRTRRYLYVRLDGTM
SIKKRAKVVERFNTPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARV
WRDGQKKTCFIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFSL
NEKTVSDTHDRFRCRRCINNRQVRPPPDDSDCTSDLSNWQHCSDKRGLRDPVLQASWDAA
VSFVFHQRSHEDQRGVV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagtctagcacccagtcagatggccaagaggaaacaaggcccggattcagac
gatgaggactgggagcctgaagtcgcatcacagagtaagagaaactgtcgagaaaactta
atctctcccttcagaaaacccctgacgccgctcaccaacacacccgtctgcgcagatggc
aatgcccatgaagacttcattcgcaagatcttatcaaagccgtttaaagtccccattcag
aattatacaggcccgttgggtctgcgcgctctgggactgaagcgggccggtgtgaggaag
gccctacacgacccgtttgaagacggagctctggttctgtacgagccgcctgccatcagc
gctcatgagctcatcaaagcagacaaggagaagttaccagtgcatgtggtggtagatcca
gtgctcactaaagtgcttcggccccatcagcgagagggtgtgaagttcctgtgggactgt
gtgacaggaaggcggattgaaaactcgtacggctgtattatggcggatgagatggggctg
ggaaagactctgcagtgcatcactctcatgtggactttacttaaacagagtcctgatttc
aaacctgagatcgataaggccatcgtagtgtccccttccagcctcgtgcgaaactggtac
aatgaagtgggcaaatggctgggtggacgcgtgcagcctgtcgctatcgatggcggctcc
aaggaggagatagatcgcaaacttgagaacttcatctcacagcatggcagaagagtgcca
actcctattttaataatatcctatgaaacattccgcctccacactgaagtcctgcacaaa
ggcaaagttggactggttatctgtgacgagggtcacaggctgaaaaactcagacaatcag
acgtaccaggcgctgaactccatgaacgctcagaggagagtgctgatatctggaacaccc
attcagaacgacttactggaatatttcagtttggtgcacttcgtaaattctggtatcctt
ggcacagctcaggagtttaagaaacgttttgagattccaatcctgaagggtcgtgacgct
gacgccagtgataaagacagagctgccggagaggagaaactccagcaactcatcagcatt
gtaaaccggtgtttgattcgaagaacctcagatattctttccaagtatctgcctgtgaag
atcgaacaagtcgtctgctgcaatcttactcctctccagaaagagctgtacaagttattc
ctgaagcagtccaaacctgtcgagagtctgcagaccggcaagatcacggtgtcttctctg
tcgtccatcacctcgcttaaaaaactctgcaaccatcctgccttgatttatgagaagtgt
ctggcaggagaagagggttttgatggcgcaatggacctcttcccacaaaattattcaact
aaagcagtagaaccacagctctcagggaagatgctggtactggattatatcctggcgatg
accagaacaacaacaagtgataaagtggttctggtctctaactacacacagactttggac
ctttttgaaaagctatgtcgaacccgaagatacctttacgttagactggatgggacaatg
tccatcaagaagagagcaaaggttgtggagagattcaacaccccctctaatccagagttc
atcttcatgctgagcagcaaggctggaggctgtgggctgaatctgattggtgcaaatcgc
ctggtgatgttcgaccctgactggaatccagccaatgacgagcaggcgatggccagagtg
tggcgagacggacagaagaagacctgcttcatctacagactgctgtcgactggaacgata
gaggaaaagatcttacagagacaggctcataagaaagctttgagcagttgtgtagtggat
gaggaacaagatgtggaaagacatttctctcttggagagctgcgagaactcttctcactc
aacgagaagacagtcagcgacacacatgacaggtttcgctgcaggcgctgtataaacaac
cgtcaggtgcgtcctcctccggatgattcggactgcaccagtgatctgtccaactggcag
cactgttcagataaaagaggcctgagggacccggtgctgcaggcgtcctgggacgccgcc
gtctccttcgtctttcaccagcgctcgcacgaggaccagagaggagtcgtctga
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