Squalius cephalus (European chub): 307165645
Help
Entry
307165645 CDS
T11930
Symbol
rps27a
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein isoform 1
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
scep Squalius cephalus (European chub)
Pathway
scep03010
Ribosome
scep04120
Ubiquitin mediated proteolysis
scep04137
Mitophagy - animal
scep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
307165645 (rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
307165645 (rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
307165645 (rps27a)
04137 Mitophagy - animal
307165645 (rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scep03011
]
307165645 (rps27a)
04121 Ubiquitin system [BR:
scep04121
]
307165645 (rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scep04147
]
307165645 (rps27a)
Ribosome [BR:
scep03011
]
Ribosomal proteins
Eukaryotes
Small subunit
307165645 (rps27a)
Archaea
307165645 (rps27a)
Ubiquitin system [BR:
scep04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
307165645 (rps27a)
Exosome [BR:
scep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
307165645 (rps27a)
Exosomal proteins of colorectal cancer cells
307165645 (rps27a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
307165645
NCBI-ProteinID:
XP_079739617
LinkDB
All DBs
Position
10:complement(39368553..39379302)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctcacggggaaaaccatcaccctcgaggttgagccctct
gatactattgaaaatgtcaaggcaaagattcaagacaaggaaggaatccctcctgatcag
cagaggttgatctttgctgggaaacagctggaggatggacgcaccctgtctgactacaac
attcagaaggagtccactctgcatctcgtgctgagactgcgtggtggtgctaagaagagg
aagaagaagtcctacaccactcccaagaagaacaagcacaagagaaagaaggtcaagctc
gctgtgcttaaatattacaaggttgacgagaacggcaagatccaccgtctgcgccgtgag
tgtcccgcggatgagtgtggagcgggggtgttcatggccagccactttgaccgtcattac
tgcgggaagtgctgcctgacttactgcttcaacaaaccagaggacaagtga
DBGET
integrated database retrieval system
