Squalius cephalus (European chub): 307165673
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Entry
307165673 CDS
T11930
Symbol
snta1
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
307165673 (snta1)
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
SOS1_NGEF_PH
PDZ_2
Motif
Other DBs
NCBI-GeneID:
307165673
NCBI-ProteinID:
XP_079739670
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Position
10:complement(1977369..2016173)
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AA seq
480 aa
AA seq
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MAAAVKPVRSGLLELRVTVHHWIRVLATLSEDSFTVSPGETGEETGNSCSPAPGAVNGDP
ANLSASPVPDTITNVKRTVRVTKQEVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNGNDLREATHDEAVQALKKTGKEVILEVKYIKEMSAFFKGGSTSGPPVLDS
PPSTPQKQSDPALKETRSLPLRMCHVTRKQCPPDTEDRYFEVVSSDRKQSVFLRAKDQAM
AQAWYNAIQTGSAALLSRAKEELKTLQSSLDIRHIGWIIEQGSERPILAVLTDRDLLLYT
SLPDSKETLSSPDKSYPLITTRLVHSGPGKSSSVHDSELTFGLRLGTKQGVETHLFRVDT
AKDLSTWTHLLVEGSHGAAELVQEVTTACSWNGKPCLLSVHIDKGFSLFTEEAGVRKNVL
LQQPFERLRMSSDDGVRMMFLDFGGPEAEIQLDLHSCPKTIVFIIHSFLSAKVKRLGLLA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcagtgaagcccgtgaggagcggattgctggagctccgcgttaccgttcac
cactggatccgcgtgcttgccactctcagcgaggactcgttcaccgtgagtcccggagaa
accggcgaggagaccgggaacagctgctcgcccgcgcccggagctgttaacggggatccg
gcgaacctcagcgcctccccggtaccggacaccatcaccaacgtcaagcgaaccgtcaga
gtcaccaaacaagaagtcggaggactcggaataagtattaagggcggtaaagagaataag
atgcccatcctgatctcaaagatcttcaaagggctggcagcggaccagacggaggctctt
tacgtgggcgatgcgattttgtccgtgaacgggaacgacctcagagaagccactcacgat
gaagctgtacaggccctgaagaaaacaggcaaagaagtcattctggaagtgaagtacatt
aaggagatgtcagcgttttttaagggtggctcgacgtcaggacccccagtgctggactct
cctccatccaccccacagaagcagtcggaccccgcgcttaaagagacccggagcctcccg
ctccgaatgtgccatgtgacccgcaaacagtgtccgcctgacacagaggaccggtatttc
gaggtggtgtcgtcggacagaaagcagtcggtgtttctgcgggcgaaggatcaggcgatg
gctcaggcctggtataacgccatccagaccggcagcgcagcgttactgagcagagccaaa
gaagagctgaagaccctgcagtccagcctcgacatcaggcacatcggctggatcatcgag
cagggttcagagaggccgatactggcggtgttgacggacagagatctactgttgtacaca
tctctacctgacagcaaagagactctcagcagcccagacaagagctatccgttaattacc
accaggctggttcactctgggccggggaagagttcctccgtccacgactctgagctgacg
ttcggtctgcgtctgggcacgaagcagggggtggagacgcacctgttcagagtggacacc
gccaaagacctgtccacctggacacacctgctggtggagggctcccacggggccgccgag
ctcgtgcaggaggtcaccacagcgtgcagctggaacgggaagccgtgtttgttgagcgtt
cacatagacaaaggcttctcgttgttcacggaggaggccggcgtcaggaagaacgttctc
ctccagcagccgttcgagcgcctgcgcatgtcctcagacgacggcgtacgcatgatgttc
ctggacttcggaggcccagaagccgagatccaactggaccttcactcgtgccctaaaacc
atcgtcttcatcattcactctttcctgtcagccaaggtcaagcgactcgggctgttggcg
taa
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