Squalius cephalus (European chub): 307165893
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Entry
307165893 CDS
T11930
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04145
Phagocytosis
scep04517
IgSF CAM signaling
scep04540
Gap junction
scep04814
Motor proteins
scep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307165893 (tubb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
307165893 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
307165893 (tubb1)
09142 Cell motility
04814 Motor proteins
307165893 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
307165893 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scep03036
]
307165893 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scep04812
]
307165893 (tubb1)
04147 Exosome [BR:
scep04147
]
307165893 (tubb1)
Chromosome and associated proteins [BR:
scep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
307165893 (tubb1)
Cytoskeleton proteins [BR:
scep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
307165893 (tubb1)
Exosome [BR:
scep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
307165893 (tubb1)
Exosomal proteins of colorectal cancer cells
307165893 (tubb1)
Exosomal proteins of bladder cancer cells
307165893 (tubb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
307165893
NCBI-ProteinID:
XP_079740080
LinkDB
All DBs
Position
10:complement(5717726..5722704)
Genome browser
AA seq
469 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINRAGTYEGDMDLQLQRINVYFSEAHGGKYV
PRALLVDLEPGTMDSVRSSLIGQLFRPDNFIHGSSGAGNNWAKGHYTEGAELVEQVVDRV
RNEAESCDCLQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVV
EPYNATLSVHQLIENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYSALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKNSNYFVDWIPHNVKVVVCDIPPRG
LKMASTFIGNNTAIQEIFKRIGEQFSLMFRRKAFLHWYTGEGMDELEFTEAESNMNDLVS
EYQQYQDATADMDYDAEDEVTEEEGLPSIVHSTRVEIKTEAVAETSDSE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagattgttcatctacagatcggacagtgtgggaatcagatcggctctaagttc
tgggaggtgatcagtgaagaacatggtattaacagagcaggaacatatgagggtgacatg
gaccttcagctgcagaggatcaatgtgtacttcagtgaagcacatggtggcaaatatgtt
ccaagagcattgttagtggacctggagccaggcactatggacagcgtgaggagcagcctc
ataggacagctcttcagaccggataattttatacacggcagttctggagctggcaataac
tgggccaaaggtcactatactgagggcgcagaacttgtggagcaggttgtggatcgtgtc
cgtaatgaagcggagagctgcgactgcttgcaggggttccagttcgtccactctctaggc
ggtggcactggttcgggaatgggtaccttgattatcaataagatccgagaggagtacccc
gaccgcatcatgaatagtttcagcgtaatgccctcgccgaaggtctccgatactgtagtg
gagccgtataacgcgaccctatcagttcaccagctgattgagaatacagatgagacgttt
tgtattgataacgaagcgctgtatgatatctgcttccgcactctcaagctcacaacgcca
acttatggagatctcaaccacctcgtatccctcaccatgagcggggtcacaacctccctc
cgcttcccaggtcaactgaacgctgaccttcggaagttggccgtcaatatggtgcccttc
ccgcgtctccatttcttcatgcctggtttcgctcctctcacagcacgtggtagccaacaa
tacagtgccctaacggtgcccgagctcacccagcagatgttcgacgcccgtaacatgatg
accgcgtgcgacccgcgtcgaggacgctatctgacagtggcgggcattttccgtggtcgc
atgtccactaaggaggttgatgagcagatgctcgccattcagcagaagaacagcaattac
ttcgtggattggatccctcacaacgtcaaagtcgttgtttgtgatatcccgccacgaggc
ctcaaaatggcctccacattcatcggaaacaacaccgccatccaggagatattcaagcgc
ataggggagcagttttcgctcatgttccgacgcaaggccttcctgcattggtacacgggg
gagggcatggatgagctggagttcacggaggcggagagcaacatgaatgatctggtttca
gaataccagcaatatcaggatgccacagccgatatggattacgacgcagaagatgaagtg
acagaagaggagggtctgccatcaatagtacacagcactcgagtagagattaagactgag
gcggtcgctgaaacctctgacagcgaatga
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integrated database retrieval system
