Squalius cephalus (European chub): 307166111
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Entry
307166111 CDS
T11930
Symbol
gga3a
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3a isoform 1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
scep Squalius cephalus (European chub)
Pathway
scep04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
307166111 (gga3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307166111 (gga3a)
Membrane trafficking [BR:
scep04131
]
Endosome - Golgi transport
Others
GGA
307166111 (gga3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
Motif
Other DBs
NCBI-GeneID:
307166111
NCBI-ProteinID:
XP_079740398
LinkDB
All DBs
Position
10:20352198..20365733
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AA seq
712 aa
AA seq
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MTGLLCSSLSSRQLCICVIMADPEGESLESWLNKATNPSNRQEEWEYIIGFCDQINKELE
GPQISVRLLAHKIQSPQEWESLQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKY
LGDRVSEQVKTKVIELLFSWSIALPDEAKITEAYQMLKMQGIVTEDPEVPVDKTLVPSPK
PKNPVFDNEEKSKRLAELLKSKKPEDLQEANRIIKSMVKEDEAIQQKASHRASTLEEVNN
SVKLLNEMLSHFKRDESTQADNELLTDLYNDCDKLRTAVFRLATETEDDDSALGDILHAS
DDLSRVINSYKKIVEGQTIVIDIPGSTASKHPNDGSSSEILIDLDSGSPSPLKHVLTPPQ
HSDSLPADLLTLAARPSSSNTSSGSSSFQISPPSSQLPSSLSLLDEELGSLGLGSLDSKS
KKSAEKNTKEAQSNHWISSQTSKPVIDLLFSSAPLNPLISTAPPTSEATSVTSFENSLQQ
SSKDFAMLDLDKANSSQSKYSSSGGRELRAWEENIHPALTTFSFPAGITPVPSAVSSAKP
QSFAPDSPLFRSLSPTLPTSHSPSGSDISLNTVFVPLEAVKPSKEGPVTAYDKDGVRVLL
HFATDHPPGRPDVLVIVVSMLNTAPLLVRNVVLQAAVPKSMRVKLQPPSGTEMVPFNPFM
PPSSITQIMLLANPLKEKVRMRYKLTLILGDRQVTESGEIDKFPPVERWGHL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcttgttgtgtagttccctctcctctcgtcagttatgcatttgtgtgatcatg
gcggatccggaaggagagtcactggagtcatggctaaacaaagccaccaatccgtcaaac
agacaggaggaatgggagtacatcattgggttctgtgaccaaatcaacaaggaacttgaa
ggcccacagatatcggtcagattattggcacataaaatccagtcaccacaagaatgggag
tcattacaagcactaactgttttagaagcctgcatgaagaattgtgggaggaggtttcat
aatgaagttggaaaatttagatttttaaatgaactcattaaagtagtttcacctaagtat
ttgggagacagagtatctgaacaagtgaagactaaagtaatagagttgctcttcagctgg
tcaattgctttaccagatgaggcaaagatcacagaggcctatcagatgctaaagatgcaa
ggtattgtaacagaagacccagaggttcctgtggacaagacccttgttccctcgccaaag
cccaagaatccagtgtttgacaatgaggaaaagagtaagcgtcttgcggaacttcttaag
agtaaaaagcctgaggatcttcaagaagccaaccgaattatcaagagcatggtcaaagag
gatgaggctatacaacagaaagcttcccatcgtgccagcaccctagaggaggtgaacaac
agtgtgaagctcctaaatgagatgctaagtcatttcaaaagagatgagtcgacacaagca
gacaatgaacttctaacggatctttataatgactgtgacaaacttcgaaccgctgtcttc
agactcgccaccgagacagaggatgatgacagtgccttaggtgatattttacacgctagt
gatgatctctcacgtgtaatcaactcatataaaaagattgttgaaggacagaccattgtg
attgacataccaggttcaacagcctcaaaacaccccaatgacggaagctcttctgagatt
ttgattgatttggactcggggtccccttcacccctcaaacatgttttgactccaccccag
cactcagattcccttcctgctgacctcctcacacttgcagctcggccttcctcttccaac
acgtcctctggatcgtcaagtttccaaatcagtcctccatcaagccagcttcccagcagt
ctttctcttctggatgaagaacttggttcattaggccttggtagtctggactcaaaatca
aagaagtcagcagaaaagaatacaaaagaagctcaaagcaatcattggatttcttcacaa
acttctaaaccagtgattgacctcctcttcagctctgctccattaaatcctctaatctca
acagcgccacctacctctgaagctacctcagtcacaagctttgaaaactccctccagcag
agcagtaaagactttgccatgctggacctggacaaggctaatagcagccagtccaaatat
tcaagctcgggtggcagagaacttagagcttgggaagagaacattcatcctgcattaacc
acattcagttttcctgctggaataacaccagtgccttctgctgtatcctctgccaaacct
cagagcttcgccccagacagccctctctttagatccctgtctccaacactacccaccagt
cactcaccctcgggctcagacatctccctaaacactgtctttgttccactggaggccgtt
aaaccaagtaaggagggtccagtgacagcctacgataaggatggtgttcgtgtgttgttg
cactttgctactgaccatccacctggtcgccctgatgttctggtgattgtggtgtccatg
ttgaacacagcaccactgttagtgaggaatgtagtgcttcaggcagctgtgccgaagtct
atgagagtgaagctgcagcccccttctggtacagaaatggttccctttaaccccttcatg
ccccccagttctatcactcagatcatgctcctggctaacccactgaaggagaaagtgaga
atgaggtacaagctgacattgatccttggagatcgacaggtcacagagtctggagagata
gacaagttccctccagtggaaagatggggtcatttatag
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