Squalius cephalus (European chub): 307166118
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Entry
307166118 CDS
T11930
Symbol
nomo
Name
(RefSeq) BOS complex subunit NOMO3
KO
K26500
BOS complex subunit NOMO
Organism
scep
Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307166118 (nomo)
Membrane trafficking [BR:
scep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
307166118 (nomo)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NOMO1-like_2nd
CarboxypepD_reg
NOMO1-like_1st
NOMO1-like_9th
NOMO_12th
Ig_NOMO
NOMO_5th
SdrD_B
SpaA
EMC7_beta-sandw
CarbopepD_reg_2
NOMO_3rd
fn3_3
NOMO_6th
NOMO_8th
fn3
Motif
Other DBs
NCBI-GeneID:
307166118
NCBI-ProteinID:
XP_079740412
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All DBs
Position
10:33541608..33572369
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AA seq
1208 aa
AA seq
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MGGIKELVFLILSFLYLTFVNGTDDILVGCGGFVKSDVEINYSVIEIKLYTKQGSLKYQT
DCAPINGYFMVPLYDKGDFVLKIEPPSGWSFEPTTVDLHVDGITDICTKEQDINFVFTGF
SVLGTVLSKGHLLGPTGVEVSLRKAGEDDVLQSVLTQAGGQYSFLKVLPGNYDITASHVS
WTLEQSSTTVVVSNENAPAAAPLVVKGYDVSGEVQSDSEPMKGVSFLLYSASVTQEDING
CSVAPVDGALIGDPSLVYLCSSQSREDGTFSFPCLPSGEYTVVPYYRGERITFDVAPSRM
DFKVQHNSLMLQPIFRVMGFSVMGRVLNSPNGEGVAEAVVTLNNQIKVETNEDGSFRLEN
MTTGTYTINTHKELMFFEPVTVKIAPSTPQLPDIITAGFSVCGHILVTRLPETVKQLGHY
KVTLSAQDQGFFRTVESDSHGAFCFQVKPGDYSLQVTLPESDVKAGLALQPYSLDISLVD
HPITDLLFTQFIASVSGSVSCLVACGDLTVTLQPVSRQGERQNLQLSGSSETLSFTFNNV
LPGKYKVSITQEEWCWKHKSVEIDVLDTYVEGVEFRQTGYLLRCSLSHAITLEFFQDGSS
PENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHQFEQDYYTYNTSAPSILTLTAVRHHMTG
LITTDKMLDVTVTIKSSIESEPALVLGPLRSNEEERREQQLLEIAARRKEREERAEEKSL
PVEEKPDELHEPFHYEFSYWARAGEKITVTPSSKEFLFYPPEVEATITGENCPGQMVEIA
GRAGLFLTGQVSPTLEGVEISIKESGATNPLITVLTDETGSYSVGPLHSDSLYDISASKE
GFVLTPVEGKTGDFKAFALAGVTFEIKAEDGVPLSGVLLSLSGASFRSNLLTQDTGLLTF
NNLSPGQYYFKPMMKEFRFEPSAQMITVEEGQVLHIPITGFKTAYSCYGTVQSIGGDAEQ
GVSVEAVGQGECGMYSEDTVTDEEGRFRLRGLRPGCNYNIQLREEGNDHIERALPPHKTI
EVGNTDIEGINIIAFRQINQFDLSGNVITSPDHLPTLWVKLYKSDNLDIDNPFQTVSLGQ
SLFFHFAPLPRDGESYVLMLQTSLSHSQYDIKLPQVSFTSSGYHKHVTLTFNPKRKMPDQ
DVSQGSFIALPLTLLLLLAVYNHERVIPLLLQLFNQIQGVLGLAQTSGDGIPMDEAKRQS
KRPKTRRT
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaattaaagagctagtgtttcttattctatcttttttgtatttgacatttgtg
aatggtactgatgatattttggtaggctgtgggggttttgtcaagtcagacgtggaaatt
aattactctgtcattgagataaagttgtacactaagcagggctctctgaaatatcagact
gactgtgcaccaatcaatggttacttcatggtccccctctatgacaagggtgattttgtt
ctaaagatagaaccaccgtcaggatggagctttgaaccaacaactgtggacctacatgtg
gatggaattactgacatctgcactaaagaacaagacatcaactttgtttttacagggttt
tcagtcctgggaactgtcttgagtaaagggcatttgttggggcctactggtgttgaagta
agtttgagaaaagcaggagaagatgatgttcttcagagtgtcctcacccaagctggaggc
cagtattcttttctcaaggtgcttccaggaaattatgacatcaccgcctctcatgtctca
tggaccctggagcagagctcaaccactgtggttgtgtcgaatgaaaatgcccccgccgca
gctcctcttgtggtaaagggctatgatgtctctggagaggtgcagagtgatagtgaaccc
atgaagggagtcagtttcctcctttactctgccagcgtaacacaggaggatattaatggc
tgcagtgtggctcctgtggatggggctttaatcggcgacccctcccttgtctatttgtgc
agctcccagtctcgtgaggatggcactttctcctttccctgtcttcccagtggtgaatac
actgtggtcccatattacagaggagagagaattacttttgatgttgctccttctcgtatg
gatttcaaagtacaacacaacagtttaatgttgcagccaatattccgggtcatgggattc
tctgtgatgggcagagttctgaatagccctaatggagagggtgttgcagaggctgtagtt
acacttaacaaccaaattaaagtggaaactaatgaagatggctcattccgattggagaat
atgaccacaggcacttataccatcaacacgcacaaggagctgatgttctttgagccagtc
actgtgaagattgctcccagcacccctcagctgccagacatcatcactgcagggttcagc
gtgtgtggtcacatcttagtcacccgtcttcctgagactgttaaacagcttgggcactat
aaagttacgctctcggcccaggatcagggctttttccgcacagttgaaagtgatagtcat
ggagcattctgctttcaagtcaaaccaggggactacagcttgcaggtgaccctccctgaa
agtgacgtaaaagctgggctcgctcttcagccatattctctcgatatttcactggtggac
catcctatcaccgatcttctcttcactcagttcatagcatctgtctccggctctgtgtcc
tgtcttgtggcatgtggagatctgacagtcacccttcagcctgtgagcagacagggagag
aggcagaacctccagttgtctggcagcagtgaaactctcagctttactttcaataatgtg
ctacccggcaagtacaaagtgtctatcacccaagaagagtggtgctggaagcataagtca
gtggagatcgatgtacttgacacatatgtagaaggagtggagttcagacaaactggatac
ttgctgcgctgctcactgtcccatgccattactctggaatttttccaagatggcagttca
ccagagaacgttggcatttacaatctgtccaaaggagtcaatcgcttctgtctgtccaaa
ccaggtgtttataaagtgactccacgttcctgtcaccagtttgaacaggattactacacc
tacaacacgtctgctccaagcatcttaaccctgactgctgtcagacaccacatgacagga
ctaatcaccactgataaaatgctggatgtcacggtcaccatcaaatcttccattgagagt
gagcctgctttggttctggggcccctgcgctcaaacgaggaagagcgaagagagcagcag
cttctggaaatagctgcccgcaggaaggagagggaagaaagagcagaggagaagagcctt
cctgtggaggagaaaccagatgaactccatgagccattccactatgaattctcctattgg
gcacgggctggggagaagatcacagtcacaccttcatccaaagaatttctgttttaccct
cctgaagtagaggctacaatcactggagagaactgtcctggtcaaatggtggagattgct
ggcagggcagggctgttcctcacagggcaggtgtcacctacactggagggtgtggaaatc
tccattaaggagagtggagctactaaccctctcattacagttctcacggatgaaactgga
tcctacagtgttggacccctacatagtgactctctgtatgacatcagtgccagtaaagag
ggctttgtcctgactccagtggagggaaagacaggagacttcaaagcgtttgccttggca
ggggtcacttttgagataaaggcagaggatggtgttcctctctcaggggttctgctgtct
ctcagtggagccagcttccgctcaaacttactcactcaggacactggcctcctcaccttc
aacaacctgagtcctggccagtactatttcaaacccatgatgaaggagttccgctttgag
ccctcagcacaaatgatcacagtagaggaaggacaggtcctccatattcctatcactggc
ttcaaaactgcatacagctgctatggaacagtgcagtcaataggtggcgatgcagagcag
ggtgtttccgtggaggcagtggggcagggagagtgtggcatgtacagtgaggacaccgtt
actgatgaagagggacgctttagactcagaggcttgcggcctgggtgtaactacaatatt
cagctgagagaagaaggaaatgatcacatagagagagcattgccaccacacaaaactatt
gaggtgggcaacactgatattgaaggaataaacataatcgcctttagacagatcaaccag
tttgatctgagtggcaatgtgatcacttcccctgatcatcttcccactctctgggtgaag
ctctacaaaagtgacaatcttgacattgacaatcccttccagactgtgtctctaggccag
tccctgttcttccacttcgcccccctaccacgtgatggagagagctacgtgttgatgctg
caaacatcactttcacactcccagtatgacatcaaactcccacaggtctctttcacgtcc
tctggttaccacaaacatgtaacactaacctttaatcctaagaggaaaatgccagatcaa
gatgtttcccaaggatctttcatcgcccttcctctgacattgctgctgttacttgctgtg
tataatcatgagcgggtgatcccacttcttctgcagctgttcaatcagatccagggtgtt
ctaggactcgctcagacaagcggggatggaatccctatggatgaagccaagcgacagtca
aagaggccaaagacaagacgtacatga
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integrated database retrieval system
