Squalius cephalus (European chub): 307166248
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Entry
307166248 CDS
T11930
Symbol
tspeara
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform 1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scep03037
]
307166248 (tspeara)
04990 Domain-containing proteins not elsewhere classified [BR:
scep04990
]
307166248 (tspeara)
Cilium and associated proteins [BR:
scep03037
]
Other cilia and associated proteins
Stereociliary proteins
307166248 (tspeara)
Domain-containing proteins not elsewhere classified [BR:
scep04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
307166248 (tspeara)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307166248
NCBI-ProteinID:
XP_079740584
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Position
10:complement(37947640..37964407)
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AA seq
677 aa
AA seq
DB search
MEGQHNLVPSLWLLALQWCLLLLPLTESVTVVPWKPCTDLHPVDLLSRVLPHNGEALAGV
RMVQEGGARGVQLFKPTQALTFPSSQLFINCAHFPAEFSIVATLKVPQTRVKKNEYLFAV
VKEDVDQLLLGLRFSKDKVHLIYRGSMGRERLSFKRIRLADNHWHSMVLAISGHHATLTL
DCGIPLELVHKQPFPSDLSTDGSRFHIGSRRKWKGLFSGLLRQLVLVPGSDATSRVCPSS
KPSLVELSVPTILSNLPVNSHMNDVLLPPYETEVRVTLGSKPACTAAEQGQLWFDTLKRG
LFLCDGAYWHSMLQDKDRLDYVDDYQDLYTTSETQDIELFQIPSVGMFAAMAHRATKPGS
AIYRWTHGQFQLYQNISTFKAQAWKQFTIGRKMFLAVSNSVGPADGKQELSVIYRWSNKR
LKFVRYQTLETHSARDWEAFHINNEAFLAVANHRTDNGNHNINSVVYKWNPGTKTFEVNQ
TISTSGAYDWEFFTVGPYHFLAVANAFDGISTQTDSSIYIWLGGAFQLFQTIRTFGATDW
EMFQIGNRVFLAVANGHMLCERGPSLYTINSTIYELDMTTKMFLKFQDIVTYSAVDWEFF
SLGDEHFLVVANSYDGSSYSLNSVIYRWQGYEGFVPIHRLPTIGCSDWEFFTSAEGSYLM
YSSAKTPLSKVFKLRIH
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacagcacaacttggtgccttcattatggctacttgcactgcagtggtgtctg
ctgcttctaccactgacagaaagtgtgaccgtcgtgccatggaaaccctgtacagatctc
catccagtggacctgctgtctcgggtgctgccccataacggagaggctctggctggggtc
cgtatggtgcaggagggaggtgctcgtggagtccagctcttcaaacctacgcaggcactc
acctttccatcttctcagctctttattaactgcgctcacttccctgcagaattctccata
gtggccactctgaaagtgcctcaaaccagagtgaagaagaatgagtacttgtttgctgtg
gtgaaggaagatgtcgatcaactcctgctcggcctgcgtttctctaaagacaaagtccat
ctcatctatcggggctcaatggggagggaacgtctcagctttaaaagaatccgcctggcg
gacaaccactggcacagcatggtattagctatcagtggccaccatgccaccctcaccctg
gactgcggcatcccactggaactggtccataaacagccatttccctctgatctcagcacc
gatggctccaggttccacattggaagtcgaaggaagtggaaaggcctgttctctggttta
ctgcgccagcttgtccttgtacctggatcggacgcgacgtcacgtgtttgcccctcctcc
aaaccgtcactggttgagctttctgtccctacaattctgtcaaacttgccagtaaattcc
cacatgaatgatgtcctgctccctccatatgagacggaggtccgtgtgactctggggtct
aaaccagcatgcacagcggcagagcagggacaactctggtttgacactcttaaaaggggc
ctcttcctatgtgatggtgcatactggcactctatgctgcaagataaagacagactagac
tatgtagatgattaccaggacctctacaccacctcagagactcaggacatcgagcttttc
cagatcccctctgttgggatgtttgctgctatggctcatcgggccaccaaaccaggctct
gccatctaccgctggacccatggccaattccagctctaccagaacatcagcacctttaag
gcccaggcatggaagcaattcacgatagggaggaagatgttcttggcggtgtcgaactcc
gtgggcccagcggacggaaagcaagagctgtctgtgatctataggtggagtaataagagg
ctgaagtttgtgagatatcagaccctggagacgcacagcgctcgtgactgggaagccttc
catattaataatgaagcttttttggctgtggccaatcaccgaacagataacgggaatcac
aacattaacagtgtcgtttataagtggaacccaggcaccaagacgtttgaggtgaaccag
accatctcgacatcaggagcatatgactgggagtttttcactgtagggccctaccacttc
ctagcagtggccaatgcatttgatggcatctccacccaaacagattcatcaatctatatc
tggcttggtggagcctttcagctctttcagactataaggacatttggggctacagactgg
gaaatgtttcagattggaaacagagtcttcctcgctgttgccaatggacacatgctgtgt
gagagaggaccaagcctctataccatcaactcaactatatatgaacttgatatgacaacc
aagatgttcctcaagttccaagacattgtaacatacagtgcggtggactgggaattcttt
tcgcttggagatgagcactttttagttgtagccaactcttatgacggatcgtcttactct
ttgaacagtgttatatacagatggcagggatatgagggttttgtccccatccatcggtta
cctactataggatgcagtgactgggagttctttacctcagcagagggttcatacctgatg
tactccagtgccaaaacacctctttccaaagtcttcaagctgagaatccactga
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