Squalius cephalus (European chub): 307166274
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Entry
307166274 CDS
T11930
Symbol
sema3fa
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa isoform 1
KO
K06840
semaphorin 3
Organism
scep Squalius cephalus (European chub)
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GFIT
Motif
Pfam:
Sema
ig
Ig_3
Ig_2
I-set
Ig_SEMA-3_4_7A
PSI
Ig_6
V-set
ASA1
zf_CCCH_5
Motif
Other DBs
NCBI-GeneID:
307166274
NCBI-ProteinID:
XP_079740645
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Position
10:complement(9200668..9265162)
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AA seq
794 aa
AA seq
DB search
MQGVGTLVLGTLLVSAFSAVSVHSSPLSSLPPASVPRVFLSFKELKSTGTAHHFAFLLNS
TDYRILRMDEDHDRMYVGSKDYILSLDLNDINKEPLIIHWPVAPQRRTECVLSGKDINGE
CGNFIRLIESWNRTHLYVCGTGAYNPICTYVDRGQRAQGLLQDQMPRAGGRTSRAADPSA
SPEPYAPKEYIFRLEPGKVDSGKGKCPYDPKLNSVSALINGQLYAGVYIDFMGTDSAIFR
TLGKHTAMRTDQYNSRWLHDPTFVHAQLIPDSAEKNDDKLYFFFREKASEMGQTPMAQSR
IGRICLNDDGGHCCLVNKWSTFLKARLICSVTGSDGIETHFDELRDVYIQKTQDIKNPVI
YGVFSVSGSVFKGSAVCVYSMADVRMVFNGPFAHKEGPNYQWVAYQGKIPYPRPGTCPGG
TFTPNMKSTKDYPDEVINFMRNHPTMFNSVYPVHKRPLVVRTNVDYEFTTITVDQVAAAD
GNYEVLFLGTDRGTIQKVIVLPRDDLQTEELVLEEVEVFRVPTPIITMKISPKRQQLYVS
SAAGVTHLALHRCDVYGEACADCCLARDPYCAWDGKSCSRYSANQKRRSRRQDVKYGNPI
RQCRGYNSNANKNTLETVQYGVEGSTAFLECQARSPHVSIKWHFQKENSDRRREIRSDGR
VVRTEQGLLLRSLQLSDGGVYQCTSTEKNFKHTLVKLQLVVLSARTINSIQTESSPPVTP
PLQSSAWTPSAEQYKDLLTILSQPEMGLINQYCQDYWQMGDDQHKKKDLKEVQKDLRKPR
NRRHHQEQSSMAET
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagtcgggactttggtgctggggacccttctggtctctgcgttctcagctgtc
tcggtccacagcagccctttgtcttccctgccacccgcctctgttccacgagtcttcctg
tccttcaaagagctgaagtctactggaaccgcccatcactttgccttcctgctcaactcg
acggactatagaatccttcgtatggacgaggaccatgatcgcatgtacgtgggcagcaag
gactacatcctgtctcttgacctgaatgacatcaacaaagagcccctcattattcactgg
cctgtggctcctcagaggaggactgagtgtgtcctctcagggaaagacatcaatggcgag
tgtggtaatttcatccgtctaatcgagtcatggaacaggactcacctgtatgtgtgtgga
acgggtgcttataaccccatctgtacctatgtggacagaggtcaaagggcacagggcttg
ctccaagatcagatgcctcgcgcaggaggccgaaccagtcgagctgcagaccctagtgcc
tcaccagaaccatacgcacccaaggaatacattttccgactggagcctggtaaagtagat
tctgggaaagggaaatgcccctacgaccccaaactaaacagcgtctcagctttgataaat
ggccagctgtatgccggcgtctacattgattttatgggaacagactcggccatctttcgc
acattgggcaaacacacagccatgaggaccgaccagtataactcccgctggctccacgat
ccaacattcgtccatgctcagctcatccctgatagtgcagaaaagaatgacgacaagctg
tatttcttcttccgtgagaaggcctctgagatgggtcagactcccatggctcagtccagg
attggcagaatttgtttgaatgatgatggaggacactgctgtctggtgaataagtggagt
actttcctgaaggctcggctcatctgctctgtgaccggctctgatggcattgagacgcat
tttgatgagctccgggacgtgtacatccagaaaacccaagacatcaagaatcctgtcatt
tacggcgtcttctccgtatctgggtctgtattcaaaggttcagcagtatgtgtgtattca
atggctgatgtccgcatggtctttaatggccctttcgctcataaggaagggccaaactac
cagtgggttgcctaccagggtaaaatcccttacccccgaccaggaacatgtccaggaggg
acgttcacccccaacatgaagtctactaaagattacccagatgaggttatcaacttcatg
cgcaaccatcccaccatgttcaattctgtttatccagtccacaagcgccccctagtggtc
cgtaccaatgtggattatgagttcaccaccatcacagtggaccaagtggctgctgctgat
ggcaactatgaagttcttttcttaggaacagatagaggaaccattcagaaagttattgtc
ctgcccagagatgatttgcagactgaagagctggttctggaggaggtggaggtctttaga
gttccaactccaatcattactatgaagatttccccaaaacggcaacagctgtatgtaagt
tcagcggcgggtgtcactcatctggctctgcacaggtgtgatgtgtacggagaggcgtgc
gctgactgctgcttggccagagacccttactgtgcctgggatggaaagtcctgctcccgc
tactctgcaaaccaaaaaaggcggagtcggaggcaagatgtgaagtatggcaaccctata
agacaatgcaggggctacaattccaatgctaataagaacacgttggagacagtacagtat
ggagtagagggaagcacagccttcctggagtgccaggccagatctcctcatgtgtcaatc
aagtggcatttccagaaagagaacagtgatagaaggagagagatccgctctgacgggcgc
gtcgttcgcacggagcagggtctcctcctgcgctctctccagctgtctgacggaggggtg
taccagtgcacctccaccgagaagaacttcaaacacacgctggtcaagcttcaactagtg
gttctttccgcccgcaccatcaacagcatccagacggaatccagccctcccgtcacaccg
cctctccagtccagcgcctggacgcccagcgcagagcagtacaaagacctgctgaccatc
ctcagccaaccagagatgggcctcatcaaccagtactgccaagactactggcagatgggg
gacgaccaacacaagaagaaggacctcaaggaagtacagaaggacctacggaagccgagg
aacaggagacaccaccaggagcagagcagcatggctgagacatga
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