Squalius cephalus (European chub): 307166292
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Entry
307166292 CDS
T11930
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein isoform 1
KO
K10891
fanconi anemia group D2 protein
Organism
scep Squalius cephalus (European chub)
Pathway
scep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
307166292 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scep03400
]
307166292 (fancd2)
DNA repair and recombination proteins [BR:
scep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
307166292 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Motif
Other DBs
NCBI-GeneID:
307166292
NCBI-ProteinID:
XP_079740674
LinkDB
All DBs
Position
10:9482290..9502283
Genome browser
AA seq
1447 aa
AA seq
DB search
MMRKKKRSSSITVDEDSTLDIPKSKKTKSSVRPTKPSIQDSHPDSVFVQFLKESGVILTP
GSTANEIAVDQVIFQKRLQQNLRKSPRFPNIIKEFISALETYIEDPERLRNCLLPCVPSS
TSQQDATSGSYQESLVRLLLGIEMLQTLVINTLFEKLPEFMFEGVSEDGLNVPRLIINQL
KWLDRIVDGKDLSSKLMQMVSVAPVEIQRDIITSLPEILEDSQHGDMAKELNGLLQQDTQ
LTVPILDALSSLNLSSALLSEVREAVMGTLSAVQLEDLAVVVKFVLHSISASDANEVKVV
CDLRKKLELEQCVLPAVLQASQSRLKSKNASRPSNVPSCSSGQDSVALILEVIKSAIRFQ
KTISEAWLKAIENVDESEDHKVVDLLVLLILHSTNANHSRRGAERVLKVKVRKGLIPESL
LQKTFKGHAQVMRGYFPSILALAQGLLRSSDCCVVPFGGHMYKQSFTAFDSYCRQEVVGS
LVTHACSGVSGEVDVALELLCELVSQRPAEMSQFTVFVKGILDYMDNLTSQQIRQLFHLL
SRLAFGQEQHGGHIQDDMHIVIRKQLSSTVPKYKRIGIIGAVMMVGSMGACRNKPDGSQG
GTLPNETHRQVMALLELVRSCSESSPEAAALCFDELANLLQTCKLDPLVLAWIGKSVLED
FQEDFIVDLGPDISGPFVFPASVMYNLDEDESQGGIAINLLPLMTQDQQHKTDTTQPAGV
KRERRVSPLCLSPFFRLLRLCEEVQHQGDLEEIDALLGCPLILTDMEVVEKVESLSKAER
EFLCSLLFHTINWLREVVNAFCRQNDPEMKMKVVTRIQNITFLQSLLQTCLAATPGYTPP
QANFDGETPEGMIPASLIAPPKKGKKESSGRKRKASASKNSSGDKSQLEGAAEAEESQQD
HPEKESEKEKEKDAKSGVSLSSYWPFFRELDVEALSVLQCGLLSRTLLDTELHSKLKEEV
QLGPAELLFLLEDMWRKLDFSLAPAKKAPFLKSKTDRAMGFAHLQQKNAKEIATCCIDLL
PTLCTHLENCHNHFQTILSEHQGVVDAPGVDVKEQQLMCSAYQLLLQVLHTTFSWAGFSG
LEHRALLKSALGVLASRLKEEETDLTLDQLSRHAFEYLQNFRSTVPSLNTALCLTQLLIV
LSQYGGSNPRNYREQITSLSRHFLCQEWVTASGEKERGNKYNEALQTLLSIYLEHTDDVL
KAVEEIAGEGVPELMNAAKDANSRSWPTLNRLTFLVYYKSMMAELEKAVRKIPPSKQTDN
QEVQSEKLLTWNLAVRDFHILINLVKIFDSRPVLTVCLKYGRLFLESFLKLGMPLLDYSF
KKHKEDVQSLLKTFQLSTRQLHHMCGHSKIRQDTGLTNHVPALKKCLEQFVYRVKAMLTL
NHCQEAFWLGNLKNRDLKGEEILSQRSQAAEEEEEEESSQLQSEVEESDSEERNNGQEEV
EESDESD
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtaagaagaagcgctcatcatccatcacagtggacgaagattccacacttgac
attccaaagtcaaaaaagaccaagagcagtgtgcgacccacaaagccttcaatacaggac
tcccacccggactcagtctttgttcagtttctgaaggaatcaggtgtcattttaacacct
ggcagtacggctaatgaaattgctgtagaccaagttatatttcaaaagcgactccagcag
aatctacgaaagagtcccagattccccaatataattaaggagtttatatctgcgctggaa
acgtacattgaagacccagagagattgagaaactgtcttctgccttgtgtgccatcatcc
acttcacagcaggatgccacttctggctcctatcaggaaagtctggtacgcttgttgctt
ggaatagagatgctacagaccctggtcataaacactttgtttgaaaagcttccagaattc
atgtttgagggagttagtgaggatggcctcaacgttccccgtctcataataaaccagtta
aagtggctggaccgaattgtagacggcaaggatttgagcagtaagctgatgcagatggtg
tctgtggctccagtggagatccagcgggacattattaccagcctgccagaaatcctggag
gattcccagcatggagacatggccaaagagctgaacggtttacttcagcaggacactcag
ctcactgtgcctatattggatgctttatccagcttgaatctgagctctgcgttattgtca
gaggtgcgtgaggcagtaatgggaactctctctgctgtgcagttagaggatcttgctgtc
gttgtgaagttcgtcttacactccatctctgcatctgatgctaatgaggtcaaggtggtg
tgtgacctgcggaaaaagctggagttggagcagtgtgttttgccagcagttctgcaggct
tcccagagtcgcttgaaaagcaaaaacgcgtcgaggccctccaatgtcccatcatgcagc
agtggtcaagacagtgtggctttgattctggaggtcataaagtcagctatccgctttcag
aaaaccatctcagaggcttggctaaaggccatagagaatgttgatgagtcagaggaccat
aaggtggttgatctgttggtgctgctcatccttcactccactaatgcaaaccacagccga
cgtggggcagagagagtgcttaaggtcaaagttcgcaagggtctgattccggaaagcctc
ttgcagaagacctttaagggccatgctcaggtgatgcggggttatttcccatccattctg
gctcttgctcaaggactcttgcgttcttcagactgctgtgtggtgcctttcggaggtcac
atgtacaaacaatccttcactgcctttgactcctactgtcggcaggaggtggtgggctct
ctggtcacacacgcatgcagtggtgttagtggcgaggtggatgtggctcttgagctgctc
tgtgagctggtatctcagagacctgcagagatgagccagttcacagtttttgtgaagggt
attctggactacatggacaacctgacctcacagcagatcagacaactcttccacctgctt
agccgcctggcgttcggacaggagcagcacgggggacacatccaggatgacatgcatatc
gtcatccgtaagcagctgtctagcacggtgcccaagtacaagcgcattggtattattggg
gcagtcatgatggtgggcagtatgggggcctgcagaaataaacctgatggctctcaaggt
ggtacactgcccaatgagacgcacagacaggtgatggctctgttggagctggtgcgctcg
tgcagtgagagttcccctgaagctgctgctctctgtttcgatgagctggccaacctgcta
cagacctgcaaactggaccctctagtgctggcatggatcgggaagagtgtgttagaggat
tttcaggaagactttattgtagaccttggaccagatatatcaggcccgttcgtgttccct
gcctctgtgatgtataatttggacgaggatgagagtcagggaggaatcgccatcaatcta
ctgcctcttatgactcaagaccagcagcacaaaacagacacaacccaaccagctggagtc
aagagagagaggcgcgtgtctcctctgtgtctgtccccgtttttccgcctgctgaggttg
tgtgaagaggtgcagcaccagggggatctggaggagatcgatgctctgctaggctgtcct
ctgatcctgactgatatggaggtggtggagaaggtggagagtctgtctaaggctgagaga
gagttcctctgttctctgctctttcacaccatcaactggctcagggaggtggtgaatgcg
ttttgcaggcagaacgatcctgagatgaaaatgaaggttgtaactcgtattcagaatatc
actttccttcagagtttactgcagacgtgcttagcagctacaccaggctacactcctcct
caggctaactttgatggagagactcctgaggggatgatacccgcttctttaatcgctccg
ccgaagaaaggaaagaaagagtcatctgggaggaagaggaaggcctcagcgagtaagaat
tcctcaggcgacaagtcacagctggagggggccgcagaggcagaggagtcccagcaggac
catccagagaaagagagcgagaaggagaaagaaaaggatgccaaatcaggggtcagtctg
tcttcgtactggccattcttcagagagttggatgttgaagctttgagcgtgctgcagtgt
ggccttctgtcccggacactactggacactgagctacatagtaagttaaaggaggaggtg
cagttgggccctgctgagttgcttttcctgctggaggatatgtggcgtaaactggacttc
agtttggctccagctaaaaaggctccatttctcaaaagtaagacagacagagcaatgggc
tttgctcacttgcaacagaaaaatgccaaggaaatcgccacctgctgcattgatctgctg
cccacactctgcacacacctggagaactgccacaatcattttcagactattctctctgag
catcagggtgttgttgatgctcctggtgtggacgtgaaggaacagcagctgatgtgttca
gcctatcagctgctactgcaagtgctacacaccacgttcagctgggccggcttttctggt
ctggagcatcgcgctctactgaagagtgctctgggggtcctggccagccggctaaaagaa
gaagagacagatttgactttagatcagctcagcaggcatgcttttgagtacctgcagaac
ttccgaagcacagtgcccagcctgaacacagccctatgtctgacccaactgctcattgtg
ctgtcccagtatggaggatcaaaccccaggaactacagagaacagatcacatccctgtca
aggcattttctctgtcaggagtgggttacagcgagtggagagaaagagcgagggaacaaa
tacaacgaggctcttcaaactctcctcagtatttatctggagcacactgatgatgttttg
aaggcggtggaggaaatagcaggtgagggggttccagagctgatgaatgctgctaaagac
gctaactcacgcagttggccaacactcaacaggctgacgttcctggtgtactacaagagc
atgatggcagagctagagaaagctgtgcgcaagattcctcccagcaaacagacagataat
caagaggtgcagagcgagaagctcttaacatggaatctggctgtgcgtgacttccacatc
ctcataaacctggtcaagatctttgacagcagacctgtactcactgtgtgtttaaagtac
ggtcgtctttttctggagtcattccttaagcttggaatgcctctgcttgactacagtttt
aaaaaacacaaggaggatgtccagagtctactgaagaccttccagctcagtactagacaa
ctccaccacatgtgtggccactcaaagattaggcaagatacgggtctgaccaatcatgtt
ccagccttgaaaaaatgtctggagcagtttgtgtatcgcgtgaaagccatgctcactctc
aaccactgccaggaagccttctggctaggaaacctgaagaacagagacttaaagggtgaa
gagattctctcacaaaggtcacaggcagctgaagaggaggaggaggaagagtcctctcag
ttgcagagtgaagtggaggagagtgactctgaggagaggaacaatggacaagaggaagtg
gaggaatcagatgaatcagactga
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