Squalius cephalus (European chub): 307166378
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Entry
307166378 CDS
T11930
Symbol
smpd2b
Name
(RefSeq) sphingomyelin phosphodiesterase 2
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00600
Sphingolipid metabolism
scep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
307166378 (smpd2b)
Enzymes [BR:
scep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
307166378 (smpd2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SPC25
SK_channel
Motif
Other DBs
NCBI-GeneID:
307166378
NCBI-ProteinID:
XP_079740814
LinkDB
All DBs
Position
10:complement(3403940..3415474)
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AA seq
436 aa
AA seq
DB search
MTTSAPIRLRVFSLNCWGIRYLSKNCRERFDLIGDLLIQEQLDIALLQEVWCEKDFLLLK
KKLGSVYPFSHYFKSGFIGSGLAVFSRHRIHDAFLYRYSLNGYPYMAQHGDWFGGKAVGK
VLLNISGLNVHVFVTHLHAEYCREKDSYLPHRVVQAWELQQFIRHTSAGADVVILGGDLN
MHPDDLGTRLLRNYTGLLDSFSEAANFDGCEEGFTHISENPFTHTDGLIPFGGGVRIDYI
LFKGSGEVDVSCESLCTTKGPVPGQPFPYSDHEALTAEFLFTPTKKGNGCKEREFGCIPD
KLPELVNTVNEARTEVKVGLHCSERMRHTAARTGIMGLVLLVLELAIAAVPLFALGAEQP
FPKASFYLLGALCFAVLLSTLMLYIFYSMEVKALQGTEDQMRLALSSLQERIKEYPKALS
SDHLRNSLDSKDSVHL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctcagcgccaatcagattacgcgtcttctctctcaactgctgggggatcaga
tacctcagtaagaactgcagagagagatttgatctgatcggagacctgctgattcaggaa
cagcttgatatagcgttactgcaggaggtctggtgtgagaaagactttctgcttttaaag
aagaagcttggcagtgtctatccgttttcccattattttaaaagtggatttataggaagc
ggactggccgtgttttccagacatcgaatccatgatgcctttctgtacagatactcatta
aatggatatccgtacatggctcaacacggagactggtttggtggcaaggctgtggggaag
gtcctgcttaacatcagtgggctgaatgttcatgtcttcgtaactcatctgcatgcagaa
tattgcagagagaaagattcgtatctcccgcaccgagtggttcaagcctgggagctgcaa
cagttcataaggcacactagtgctggagcggacgtggtgattctgggtggagatctgaac
atgcacccagacgatctcgggaccagactgctgagaaactacactggactcctggacagc
ttcagtgaggccgccaactttgacggatgtgaggaaggattcacccatatatctgaaaac
cctttcacacacacggatggcctcattccatttgggggaggagtccggatagactacatc
ctgttcaagggatcaggggaagtagatgtgagctgtgagtctttgtgcaccactaagggt
ccagttcctggacagccttttccttattcagaccacgaggctctcactgccgagttcctg
tttacgccaactaaaaagggaaatggatgcaaagagagagaatttggctgtattccagat
aagcttcctgagctggtcaacacagtcaatgaagctcgtactgaagtaaaggtgggtcta
cactgctctgagcgcatgcgccacaccgcggctcgtacaggcatcatgggtcttgtcctg
ctagtacttgagttagccatcgccgctgtcccgttgtttgctctgggagctgaacagccc
tttcctaaagcctctttctacctgctgggggcgctgtgctttgccgtcctcctctctaca
ttgatgctgtacatcttctacagcatggaggtgaaggcactgcaaggcactgaggaccag
atgagactggcactgagtagtcttcaggaacggattaaggagtaccccaaggctttatca
tcggaccatttgcgaaattcacttgacagcaaggattctgtgcatttgtag
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