KEGG   Squalius cephalus (European chub): 307167140
Entry
307167140         CDS       T11930                                 
Symbol
chrd
Name
(RefSeq) chordin
  KO
K04657  chordin
Organism
scep  Squalius cephalus (European chub)
Pathway
scep04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:scep00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    307167140 (chrd)
SSDB
Motif
Pfam: CHRD VWC VWC2L_2nd Amnionless
Other DBs
NCBI-GeneID: 307167140
NCBI-ProteinID: XP_079742209
LinkDB
Position
11:complement(515838..539597)
AA seq 945 aa
MELLRVLWILGCACMSSVQSSRLKTPALPIQPEREPVISKGLSGCSFGGRFYSLEDTWHP
DLGEPFGVMHCVMCHCEPQRSRRGKVFGKVSCRNMKQDCPEPTCDDPVLTPGHCCKTCPK
GDTSRKEAESLFEFFQEKDDDLHKSYNDRSYVSSEENSHRDSATDFVSLLTGVSDSWLPS
SSGVARARFTLSRTSLTFSITFQRINRPSGITFLDSDGNTAFEFRVPRADTDMICGVWKN
LPKSQIRQLEAEQLRVSMTTADNKKEELRGKIIKHRALFAETFSAILTSEEVHSGMGGIA
MLTLSDTENNLHFILIQQGLVSHGSSSAQMPVRVKLLYRQHVLREIRANISTDDSDLAEV
LADLNSRELFWLSRGQLQIAVETEGQNPRQISGYISGKRSCDTLQSVMSGGSALTPGKTG
GVGSAVFTLHPNGSLDYQVLVAGLTSAVVGVTVEMKPRRRSKRSVLYDITADFSAGVGER
GGDGRAAGSLSRVEARHIHMLLQNELFINIATAQQQESELRGQIRMLPYNGLDARRNELP
VPLAGQFVSPPVRTGAAGHAWVSVDQQCHLHYEIVVNGLSRSEDASINAHLHGLAEIGEM
DDSSTNHKRLLTGFYGQQAQGVLKDISVELLRHLDQGMAYIQVSTKMNPRGEIRGRIQVP
NSCESGSRGEVVEEDEFHELVFVRDPAELKKDPHTCFFEGEHHAHGSQWTPQYNTCFSCS
CQKKTVICDPVICPALSCPHTLQPEDQCCPVCDEKKETKETTVVEKIEEDPEGCYFEGDQ
KMHAPGTTWHPFVPPFGYIKCAVCTCKGSTGEVHCEKVTCPPLTCSRPIRANPSDCCKAC
PAEDTPPLEDEEMMQADGTRHCKFGKNYYQNSEHWHPSVPLVGEMKCITCWCDHGVTKCQ
RKQCPLLSCRNHIRREGTCCPECIEDFMEKEEMAKMVEKKKNWRH
NT seq 2838 nt   +upstreamnt  +downstreamnt
atggagttgctgcgcgtgctgtggattctgggatgcgcgtgcatgtcttcggttcagagc
tcgcgcctgaagacgcccgcgttaccgatccagcccgagcgcgagcccgtcatatctaaa
ggcttgtccggttgctccttcggtggccgcttttattccctggaagacacgtggcatcca
gacctcggagaacccttcggtgtgatgcactgcgtcatgtgtcactgtgaaccgcagagg
agtcggagagggaaggtgttcgggaaggtgagctgcaggaatatgaagcaggattgtccc
gaaccgacctgtgacgatccagtgctcactccaggacactgctgcaaaacatgtcccaaa
ggcgacacatcgaggaaggaggcggagtctttgttcgagttcttccaggagaaagacgac
gacctgcacaagtcgtacaacgacagatcctacgtcagctctgaagagaacagtcatcga
gacagcgcgaccgatttcgtgtctctgctgacgggtgtgtcggactcttggttgcccagt
tccagtggagtcgctcgggctcgattcactctctctcgcaccagcctgaccttctccatc
accttccagaggatcaacaggccgagtggaatcaccttcctggactccgacggaaacact
gcatttgagttcagggtcccgagggccgacacggacatgatctgtggagtttggaagaat
ctcccaaagtctcaaattcgacagctggaggcggagcaactgcgtgtttccatgacaacc
gctgacaacaagaaggaggagctacggggaaaaatcatcaaacacagagcactgtttgca
gaaacgttcagtgcgatcctgacgtctgaagaggtgcattctgggatgggcggaatcgcc
atgttgacgctcagtgacaccgagaacaatctgcatttcatcctgattcagcagggactc
gtttctcacgggagttcctctgcacagatgccggtgagagtgaaactgctgtaccgacaa
catgtgctgagagaaatccgagcaaacatctctacagacgactctgacctggctgaagtc
ctagcggatctgaacagtcgggaactcttctggttatcccgcgggcagctccagatcgcc
gtagaaacggaaggtcaaaacccccgtcagatctccggatacatttctgggaagagatca
tgtgacactcttcaaagtgtgatgtccggcggatccgctctgactcccgggaaaaccggc
ggcgtgggatcggccgtcttcacgctccatcccaacgggtcgctcgactaccaggttctg
gtggcgggcctgaccagcgcagtggtcggcgtgacggtggagatgaagccgcggcggcgc
agtaaacgcagcgttctgtacgacatcacggcggacttcagtgcgggtgtgggtgagcgc
ggtggggacggcagggcggcggggagcctcagccgtgtggaggccagacacattcacatg
ctcctgcagaacgagctgttcatcaacatcgccacggcacagcagcaggagagcgagctg
cgcggacagatacgcatgctaccgtacaacggactcgacgcgcgacgcaacgagctcccg
gttcctctggcgggtcagttcgtgtctcctccggtgcgtacgggcgccgcgggtcacgcc
tgggtctcggtggaccaacagtgtcatctacactacgagatcgtggtcaacggcctcagc
aggagcgaagacgcctccatcaacgctcacctgcacggattggccgagatcggcgagatg
gacgactcctccaccaatcacaagagacttctgacgggcttctacggccaacaggctcag
ggtgtgttgaaggatatcagtgtcgagttgttgaggcatctggaccaaggcatggcttat
attcaggtcagcaccaaaatgaatccaagaggagaaatacgaggacggatccaggtcccc
aacagctgcgagtcgggctctcggggggaggtggtggaggaggacgagttccacgagctg
gtgttcgtgcgcgacccggcggagctgaagaaggacccgcacacatgcttcttcgagggg
gaacaccacgcacacgggtctcagtggaccccgcagtacaacacctgcttcagctgctcc
tgccagaagaagacggtgatctgtgacccggtgatctgtcctgcgctctcgtgtcctcac
actctccagcctgaagaccagtgctgcccggtgtgtgacgaaaagaaggagaccaaagag
acgactgttgtagaaaaaattgaggaagatccagaaggctgttatttcgaaggcgatcag
aagatgcacgcacctggaacaacatggcatccgttcgtcccaccgttcgggtacatcaag
tgtgccgtgtgcacctgcaagggctccacaggagaagtgcactgcgagaaggtgacgtgc
ccgcccctaacctgcagtcgaccaatcagagccaacccttcagactgctgcaaggcgtgt
cctgccgaagacacgccccctctggaggacgaggagatgatgcaggccgacggaacgcgc
cattgcaagttcggcaaaaactactaccagaacagtgaacactggcacccgagcgtcccg
ctggtgggcgagatgaagtgcatcacctgctggtgtgaccacggcgtgacgaagtgccag
cggaagcagtgtccgctgctgagctgcaggaaccacatccgccgagagggaacgtgctgt
cccgagtgcatagaggactttatggaaaaagaagaaatggcaaagatggtagagaaaaag
aaaaactggagacactga

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