Squalius cephalus (European chub): 307167140
Help
Entry
307167140 CDS
T11930
Symbol
chrd
Name
(RefSeq) chordin
KO
K04657
chordin
Organism
scep Squalius cephalus (European chub)
Pathway
scep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
307167140 (chrd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHRD
VWC
VWC2L_2nd
Amnionless
Motif
Other DBs
NCBI-GeneID:
307167140
NCBI-ProteinID:
XP_079742209
LinkDB
All DBs
Position
11:complement(515838..539597)
Genome browser
AA seq
945 aa
AA seq
DB search
MELLRVLWILGCACMSSVQSSRLKTPALPIQPEREPVISKGLSGCSFGGRFYSLEDTWHP
DLGEPFGVMHCVMCHCEPQRSRRGKVFGKVSCRNMKQDCPEPTCDDPVLTPGHCCKTCPK
GDTSRKEAESLFEFFQEKDDDLHKSYNDRSYVSSEENSHRDSATDFVSLLTGVSDSWLPS
SSGVARARFTLSRTSLTFSITFQRINRPSGITFLDSDGNTAFEFRVPRADTDMICGVWKN
LPKSQIRQLEAEQLRVSMTTADNKKEELRGKIIKHRALFAETFSAILTSEEVHSGMGGIA
MLTLSDTENNLHFILIQQGLVSHGSSSAQMPVRVKLLYRQHVLREIRANISTDDSDLAEV
LADLNSRELFWLSRGQLQIAVETEGQNPRQISGYISGKRSCDTLQSVMSGGSALTPGKTG
GVGSAVFTLHPNGSLDYQVLVAGLTSAVVGVTVEMKPRRRSKRSVLYDITADFSAGVGER
GGDGRAAGSLSRVEARHIHMLLQNELFINIATAQQQESELRGQIRMLPYNGLDARRNELP
VPLAGQFVSPPVRTGAAGHAWVSVDQQCHLHYEIVVNGLSRSEDASINAHLHGLAEIGEM
DDSSTNHKRLLTGFYGQQAQGVLKDISVELLRHLDQGMAYIQVSTKMNPRGEIRGRIQVP
NSCESGSRGEVVEEDEFHELVFVRDPAELKKDPHTCFFEGEHHAHGSQWTPQYNTCFSCS
CQKKTVICDPVICPALSCPHTLQPEDQCCPVCDEKKETKETTVVEKIEEDPEGCYFEGDQ
KMHAPGTTWHPFVPPFGYIKCAVCTCKGSTGEVHCEKVTCPPLTCSRPIRANPSDCCKAC
PAEDTPPLEDEEMMQADGTRHCKFGKNYYQNSEHWHPSVPLVGEMKCITCWCDHGVTKCQ
RKQCPLLSCRNHIRREGTCCPECIEDFMEKEEMAKMVEKKKNWRH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctgcgcgtgctgtggattctgggatgcgcgtgcatgtcttcggttcagagc
tcgcgcctgaagacgcccgcgttaccgatccagcccgagcgcgagcccgtcatatctaaa
ggcttgtccggttgctccttcggtggccgcttttattccctggaagacacgtggcatcca
gacctcggagaacccttcggtgtgatgcactgcgtcatgtgtcactgtgaaccgcagagg
agtcggagagggaaggtgttcgggaaggtgagctgcaggaatatgaagcaggattgtccc
gaaccgacctgtgacgatccagtgctcactccaggacactgctgcaaaacatgtcccaaa
ggcgacacatcgaggaaggaggcggagtctttgttcgagttcttccaggagaaagacgac
gacctgcacaagtcgtacaacgacagatcctacgtcagctctgaagagaacagtcatcga
gacagcgcgaccgatttcgtgtctctgctgacgggtgtgtcggactcttggttgcccagt
tccagtggagtcgctcgggctcgattcactctctctcgcaccagcctgaccttctccatc
accttccagaggatcaacaggccgagtggaatcaccttcctggactccgacggaaacact
gcatttgagttcagggtcccgagggccgacacggacatgatctgtggagtttggaagaat
ctcccaaagtctcaaattcgacagctggaggcggagcaactgcgtgtttccatgacaacc
gctgacaacaagaaggaggagctacggggaaaaatcatcaaacacagagcactgtttgca
gaaacgttcagtgcgatcctgacgtctgaagaggtgcattctgggatgggcggaatcgcc
atgttgacgctcagtgacaccgagaacaatctgcatttcatcctgattcagcagggactc
gtttctcacgggagttcctctgcacagatgccggtgagagtgaaactgctgtaccgacaa
catgtgctgagagaaatccgagcaaacatctctacagacgactctgacctggctgaagtc
ctagcggatctgaacagtcgggaactcttctggttatcccgcgggcagctccagatcgcc
gtagaaacggaaggtcaaaacccccgtcagatctccggatacatttctgggaagagatca
tgtgacactcttcaaagtgtgatgtccggcggatccgctctgactcccgggaaaaccggc
ggcgtgggatcggccgtcttcacgctccatcccaacgggtcgctcgactaccaggttctg
gtggcgggcctgaccagcgcagtggtcggcgtgacggtggagatgaagccgcggcggcgc
agtaaacgcagcgttctgtacgacatcacggcggacttcagtgcgggtgtgggtgagcgc
ggtggggacggcagggcggcggggagcctcagccgtgtggaggccagacacattcacatg
ctcctgcagaacgagctgttcatcaacatcgccacggcacagcagcaggagagcgagctg
cgcggacagatacgcatgctaccgtacaacggactcgacgcgcgacgcaacgagctcccg
gttcctctggcgggtcagttcgtgtctcctccggtgcgtacgggcgccgcgggtcacgcc
tgggtctcggtggaccaacagtgtcatctacactacgagatcgtggtcaacggcctcagc
aggagcgaagacgcctccatcaacgctcacctgcacggattggccgagatcggcgagatg
gacgactcctccaccaatcacaagagacttctgacgggcttctacggccaacaggctcag
ggtgtgttgaaggatatcagtgtcgagttgttgaggcatctggaccaaggcatggcttat
attcaggtcagcaccaaaatgaatccaagaggagaaatacgaggacggatccaggtcccc
aacagctgcgagtcgggctctcggggggaggtggtggaggaggacgagttccacgagctg
gtgttcgtgcgcgacccggcggagctgaagaaggacccgcacacatgcttcttcgagggg
gaacaccacgcacacgggtctcagtggaccccgcagtacaacacctgcttcagctgctcc
tgccagaagaagacggtgatctgtgacccggtgatctgtcctgcgctctcgtgtcctcac
actctccagcctgaagaccagtgctgcccggtgtgtgacgaaaagaaggagaccaaagag
acgactgttgtagaaaaaattgaggaagatccagaaggctgttatttcgaaggcgatcag
aagatgcacgcacctggaacaacatggcatccgttcgtcccaccgttcgggtacatcaag
tgtgccgtgtgcacctgcaagggctccacaggagaagtgcactgcgagaaggtgacgtgc
ccgcccctaacctgcagtcgaccaatcagagccaacccttcagactgctgcaaggcgtgt
cctgccgaagacacgccccctctggaggacgaggagatgatgcaggccgacggaacgcgc
cattgcaagttcggcaaaaactactaccagaacagtgaacactggcacccgagcgtcccg
ctggtgggcgagatgaagtgcatcacctgctggtgtgaccacggcgtgacgaagtgccag
cggaagcagtgtccgctgctgagctgcaggaaccacatccgccgagagggaacgtgctgt
cccgagtgcatagaggactttatggaaaaagaagaaatggcaaagatggtagagaaaaag
aaaaactggagacactga
DBGET
integrated database retrieval system