Squalius cephalus (European chub): 307167556
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Entry
307167556 CDS
T11930
Symbol
actn4
Name
(RefSeq) alpha-actinin-4 isoform 5
KO
K05699
actinin alpha 1/4
Organism
scep Squalius cephalus (European chub)
Pathway
scep04510
Focal adhesion
scep04517
IgSF CAM signaling
scep04518
Integrin signaling
scep04519
Cadherin signaling
scep04520
Adherens junction
scep04530
Tight junction
scep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307167556 (actn4)
04518 Integrin signaling
307167556 (actn4)
04519 Cadherin signaling
307167556 (actn4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307167556 (actn4)
04520 Adherens junction
307167556 (actn4)
04530 Tight junction
307167556 (actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
307167556 (actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307167556 (actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scep04812
]
307167556 (actn4)
04147 Exosome [BR:
scep04147
]
307167556 (actn4)
Membrane trafficking [BR:
scep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
307167556 (actn4)
Cytoskeleton proteins [BR:
scep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
307167556 (actn4)
Exosome [BR:
scep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
307167556 (actn4)
Exosomal proteins of colorectal cancer cells
307167556 (actn4)
Exosomal proteins of bladder cancer cells
307167556 (actn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
307167556
NCBI-ProteinID:
XP_079742877
LinkDB
All DBs
Position
11:complement(7480069..7527891)
Genome browser
AA seq
924 aa
AA seq
DB search
MVDYHAANNQTHYSSSGQQQSYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKSGT
QIENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSI
GAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFH
ISWKDGLAFNALIHRHRPELIDYDKLRKDDPVTNLNNAFEVAERYLDIPKMLDAEDIVGT
LRPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWI
RRTIPWLENRAPEKTMTEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGRMVSDINGAWHKLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHESWT
DGKEAMLTQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSP
SVNARCQKICEQWDALGTLTQNRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAME
DLQDMFIVHNIEEIQGLITAHEQFKSTLPEANKERESIQAIQAEVQKIAQYNGIKLAGNN
PYTSITPQSIDKKWEKVQQLVPQRDQALQEELARQQSNDHLRRQFANQANMIGPWIQNKM
EEIGRISIEMNGTLEDQLTHLRQYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTSYTM
EHLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGVLQAEE
FKACLISLGYDVETDKQKRTGIMDSDDFRALLISTGNSLGEAEFARIMGIVDPNNSGAVT
FQAFIDFMSRETTDTDTADQVIASFKILAGDKNYITAEELRRELPPDQAEYCIARMAPYA
GPDAVPGALDYMSFSTALYGESDL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgctgctaataatcaaacacattattcgtccagcggtcaacagcag
agctacatggagcaggagaacgattgggatcgggacctactactggacccggcctgggag
aaacagcagaggaagaccttcacggcctggtgcaactctcacctgcgaaagtcgggaact
cagatcgaaaacatcgaggaggatttcagagatggactcaaactgatgctgctcctagag
gtcatctcaggggagagattacctaaacctgaaagaggaaagatgagagtgcacaagatc
aacaatgtcaacaaagcgctggacttcatcgccagcaaaggagtcaaactggtgtccatc
ggtgcagaagaaattgtggatggaaatgccaagatgactctgggaatgatctggaccatc
atcctccgcttcgccatccaggacatctcagtggaggaaacctctgctaaagaaggactt
ctgctctggtgtcagagaaagacggctccttacaagaacgtcaacgttcagaacttccat
atcagctggaaggatggtcttgccttcaatgctctgatccatagacacaggccagagctc
attgattatgacaagctgagaaaggacgacccagtgaccaatctgaacaatgccttcgaa
gtggcagagcgatacctcgacatccccaagatgttggatgcagaggatatcgtgggcact
ctgcggccggatgagaaggctattatgacctacgtctcctgtttctatcacgccttctca
ggtgctcagaaggctgagacagcagccaatcgtatctgtaaggtattggcggtcaatcag
gagaatgagcacctgatggaggactatgaaaaactggccagcgatctgttggagtggatt
cgtaggacaatcccatggttggaaaatcgtgctccagagaaaaccatgacagaaatgcag
cagaaattggaagatttccgcgattaccgtcgggttcacaaaccacccaaagttcaggag
aagtgtcagctagagatcaacttcaacacgttgcagaccaaactccgtctgagcaaccga
ccagcctttatgccatctgagggacgcatggtgtcggatattaatggtgcctggcataaa
ctggaaggagcagagaaaggctatgaggagtggctactgaatgagatccgtcgtttggaa
agacttgaccatcttgcagaaaagttccgtcagaaagcagccatccatgagagctggaca
gatggtaaggaggccatgctaacacagaaggattatgagaccgcaacactgtctgagatc
aaagctctcttgaagaagcatgaggctttcgaaagtgaccttgctgcccaccaggacaga
gtggagcagattgccgccattgcacaagaactcaatgagctggactactatgactcccca
agcgttaatgcacgctgtcagaagatctgcgagcaatgggatgctctgggtaccctcaca
cagaaccgcagagagtctcttgagagaacagagaaacagctggagtctattgatgaactc
tacctggagtacgccaagagagcagcgccattcaacaactggatggagggagccatggag
gaccttcaggacatgttcattgtacacaacatagaggagatccagggactgataactgct
catgagcagttcaaatcaactcttccagaggcaaataaagagcgggaatctatccaggcc
atccaggctgaagttcagaaaatcgcacagtacaatggcatcaaactggctggaaacaat
ccttacacctccatcacccctcagagcattgataagaagtgggagaaggtgcagcaactg
gttccacagcgtgatcaggctcttcaggaagaacttgcacgtcagcagtctaatgaccat
ctcagacgccagtttgccaaccaggccaacatgattggaccatggatccaaaataagatg
gaggagattgggcggatatcaattgagatgaatggaacgctggaagatcagctgacccac
cttcgtcagtatgagcagagcatcatcgaatacaaacccaacatcgaccaactggaggga
gaccatcagctcattcaggaagcacttatatttgacaacaaatacacttcttacactatg
gagcaccttcgtgttggttgggagcaactccttaccacaattgcccgcaccattaatgag
atcgagaaccagattctgactcgtgatgctaaaggcattagccaggagcagctgcacgag
taccgcacgtctttcaatcacttcgacaaggaccacagtggtgtcttacaggctgaggag
ttcaaggcttgtttgatcagtctgggttacgacgtagaaaccgacaaacagaagcgcacg
gggataatggacagcgacgatttccgcgctctgctcatttccactgggaacagcctgggt
gaagctgaatttgctcgtattatgggcattgttgaccccaacaacagtggagcagtgacc
ttccaggccttcatcgacttcatgtcaagggaaacgaccgacacggacaccgcagaccag
gtcatcgcctcatttaagatcctagccggagacaagaactacatcacagctgaggagttg
aggcgtgagcttcctcctgaccaggcggagtattgcattgcccgaatggcaccgtacgcc
ggccctgacgcagtgccgggtgctcttgactacatgtccttctccaccgctctgtacggg
gagagcgacctctaa
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