Squalius cephalus (European chub): 307167681
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Entry
307167681 CDS
T11930
Symbol
sars2
Name
(RefSeq) serine--tRNA ligase, mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
307167681 (sars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scep01007
]
307167681 (sars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scep03016
]
307167681 (sars2)
Enzymes [BR:
scep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
307167681 (sars2)
Amino acid related enzymes [BR:
scep01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
307167681 (sars2)
Transfer RNA biogenesis [BR:
scep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
307167681 (sars2)
Prokaryotic type
307167681 (sars2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CCDC110
DUF730
Map3k7cl
Motif
Other DBs
NCBI-GeneID:
307167681
NCBI-ProteinID:
XP_079743067
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All DBs
Position
11:11990769..11998602
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AA seq
513 aa
AA seq
DB search
MASSVRAATRCCSFYLLTSSRLNVSSGFRWSCRPCSSRPVRSSLYEHVRDGYSHKPELDM
QRVCDETDAVTAEVHNRKGDLQAADVGVIVSVWKKLQKVQKEISDLEKRKHVISGKVRAL
VDEHDKSTLSSLVEYNSAREEGRALREKLSQLYLQESELEKEHYCRALRLPNRTHPSVPI
GDESQARVVELVGQRREFDFKPKGHLEIGEGLDIIRQRRLAHVSGHRSYYLRGAGARLQF
ALQNFTMDLLQKLGFIPMVVPDMLKSVVFEGCGMQPHAHKSQVYSLDPSRFPDLNLAGTG
EVGVAGYFMDHAVNLKDLPVRTICSSTCYRAETDTGRETWGLYRVHHFNKIEMFGVTSNE
TGEESSQLLDEFVMLQKEIFSSLKLHYRVLDMPTQELGPPAFRKYDIEAWMPGRGSFGEI
SSASNCTDYQSRRLNILYEGNDGNPKYAHTVNATACAIPRTIIAILETHQTKEGTVQIPE
VLQHYLGLDVIEKPKYTPIKYMGPNQPKRHTSK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctgtaagggcagctacacggtgttgctctttttatctgcttacgtcttcg
agactaaatgtcagcagtggatttagatggtcctgccgaccttgctcctctcgaccggtc
aggagcagcctctatgagcatgtacgggacgggtacagtcacaaacccgagctggacatg
cagcgtgtgtgcgatgagacagatgcggtgacagcggaggtgcacaatcggaaaggagat
ctgcaggcagctgatgtcggagttatagtctcagtctggaagaaactacagaaggtgcaa
aaggaaatatcagatttggaaaagagaaagcatgtgatcagtggcaaagtccgcgctctt
gtagatgaacatgacaaatccactttgtctagtcttgtggagtacaacagtgcgagagaa
gaaggcagagcactcagggagaaacttagtcagttgtatctgcaagagagcgagctggag
aaagaacattactgccgcgctctacgactgcccaacagaacacatccaagtgtgcccatc
ggagatgagagccaggcaagagtggttgaattggttggtcagcgacgagaatttgatttc
aaaccaaaaggccacctggaaattggagagggtcttgacatcataagacagagacggctt
gcccatgtgtcagggcacagatcgtactacttgagaggggcaggggccagacttcagttt
gccttgcaaaattttactatggatcttcttcagaaattgggctttattcccatggttgtt
cctgacatgttaaaatcagtggtttttgaaggttgtgggatgcagcctcatgctcataaa
tcacaggtgtactctctggacccgtcacgatttcctgaccttaatcttgctggaacaggg
gaagtaggagtggcaggatatttcatggatcatgctgtaaatttgaaggatttacctgtc
aggaccatctgtagtagcacatgttatcgagcagaaacagatactggaagagagacctgg
gggctctacagagttcaccattttaacaagattgaaatgttcggtgtgacttcgaatgag
acgggagaggagagttcccaattgctggatgaatttgtcatgttacagaaggagattttc
tcttccctaaagcttcattacagagtcttggatatgcccactcaagaattggggcctcct
gccttccgaaagtatgatattgaggcatggatgccaggacgtggcagctttggagagatc
tccagtgcctcaaactgcacagactaccagagccgacgtcttaacattctctatgaggga
aatgatggaaaccctaagtatgcgcatacagtaaatgctacagcttgtgctattccacgc
accatcattgccattttggagacacaccaaaccaaggaagggacagttcagattcctgaa
gtcttgcagcactatcttggcttggatgtgatagaaaaacctaaatacactcctattaaa
tatatgggaccaaaccaacccaagcgacatacctcaaaataa
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