Squalius cephalus (European chub): 307168099
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Entry
307168099 CDS
T11930
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform 1
KO
K08550
estrogen receptor alpha
Organism
scep Squalius cephalus (European chub)
Pathway
scep04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
307168099 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307168099 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scep03310
]
307168099 (esr1)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
307168099 (esr1)
Nuclear receptors [BR:
scep03310
]
3. Estrogen like
3A. Estrogen receptor
307168099 (esr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
307168099
NCBI-ProteinID:
XP_079743820
LinkDB
All DBs
Position
12:8101972..8115890
Genome browser
AA seq
603 aa
AA seq
DB search
MVMSGGQTSGEAAGARQRHRTNLNPEREDLEGLSSPPTAHKLSPMYPKEEHSAGGTSSSV
NYLDGAYEYPDPTQTYGTTSPAEPASVGYYPAPTDPHAPPVEEHLQTLGGESSSPLMFAP
TSPQLSPYLSHHGGHHSTHQVSYYLDTSSSTVYRSSVVSSQQAGVGLCEVLCSATDRQEM
YPARAAGGFDSEKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQC
TIDRNRRKSCQACRLRKCYEVGMMKGGIRKDRGGRAIRRERRKSSNEDRDKSYSELSSRV
GLRTAQDKRKKSSGGVVSALCMPPDQVLVLLLGAEPPAVCSRQKHSPPYTEITMMSLLTN
MADKELVHMIAWAKKVPGFQDLSLHDQVQLLESSWLEVLMIGLIWRSIHSPGKLIFAQDL
ILDRNEGECVEGMAEIFDMLLATVARFRSLKLKLEEFVCLKAIILLNSGAFSFCSSPVEP
LMDSFMVQCMLDNITDALIYGISKSGASLQLQSRRQAQLLLLLSHIRHMSNKGMEHLYHM
KCKNRVPLYDLLLEMLDAQRFQSPGEVQRLRAQSEKDSPSTPSTRGPGAMQPNTACLSQS
PDP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtctggagggcagaccagcggagaggctgctggtgccaggcagcggcacagg
accaacctgaacccggagagagaagacctggagggactttcctcaccgcccactgcccac
aaactctcacccatgtaccccaaggaggagcacagcgcagggggcaccagctcctctgtc
aattaccttgatggagcctatgagtacccagaccccacacagacctacggcaccacgtca
cccgcagagcctgcctctgtcggatactacccggctcccacggacccccacgcgcccccc
gttgaagaacatctgcagacgttaggcggcgaatccagcagccctctcatgtttgcaccc
accagccctcagctgtccccgtacctgagccatcatggaggacaccactcgacccaccag
gtgtcctactacctggacacctcgtctagcacagtctacaggtccagtgtggtgtcttct
cagcaggcaggtgttggtctgtgtgaggtgttgtgcagtgcgactgacaggcaggagatg
tatcctgcaagagctgcaggagggtttgattcagagaaggagacgcgcttctgtgcggtg
tgcagtgactatgcctctggctatcattatggagtctggtcctgtgagggatgcaaagct
ttcttcaagagaagcattcaaggtcacaatgactatgtttgtccagcgaccaaccagtgc
actattgacagaaaccgcaggaagagctgccaagcatgcaggctacgcaagtgttatgaa
gtaggcatgatgaaaggaggtattcgtaaggaccgcggtggccgcgctatcaggcgtgag
cggaggaagagcagtaatgaggatcgtgacaagagctacagtgagctgtcaagtcgtgtc
ggactgaggacagctcaggacaagaggaagaagagcagcggcggggtggtcagcgcttta
tgcatgccacctgaccaggtgctggtgttgctcctgggtgcagaaccaccggccgtctgt
tcacgtcagaagcacagccccccgtacaccgagatcaccatgatgtccctgctcacaaac
atggctgacaaagaactcgtccacatgatcgcctgggctaagaaagtaccagggttccag
gacctctctctgcatgaccaggttcagttgttggagagctcttggctggaggtgttgatg
atcggcctcatatggaggtccattcattcacctggaaaactcatctttgctcaggatctc
atcctcgataggaatgaaggagaatgtgtcgaggggatggctgagattttcgacatgctt
ttggcgactgtggctcgattccgcagtctcaaactcaagctggaggaatttgtatgtctt
aaagccatcatacttctcaattctggtgcattttcattctgctccagtccagtggagccc
ctgatggacagcttcatggtgcagtgcatgctggacaacatcactgatgccctcatttac
ggcatcagtaaatccggtgcctctctgcagctgcagtcccggcgtcaggcgcagctcctg
ctactgctctcccacatcagacacatgagcaacaaaggaatggagcacttataccatatg
aaatgtaagaatcgagtcccgctgtatgatcttttgctggagatgctggatgcccagcga
ttccaatccccaggagaggtgcagcgactgagggcacagagtgagaaagactccccgtct
acaccatccaccagaggacctggagccatgcagcccaacactgcctgtctcagccaaagc
ccagacccctga
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