Squalius cephalus (European chub): 307168363
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Entry
307168363 CDS
T11930
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform 1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
307168363 (gpcpd1)
Enzymes [BR:
scep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
307168363 (gpcpd1)
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
Motif
Other DBs
NCBI-GeneID:
307168363
NCBI-ProteinID:
XP_079744364
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All DBs
Position
12:complement(32932608..32955404)
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AA seq
683 aa
AA seq
DB search
MDCFHQVSSLSSPFACVSVMDSTSVTLTVRGTTARQGEVIAVVGSCETLGSWFHQKAVPL
QPAEEDGTLWRTTIQVPRGRETKYRYFKGFFFESKNDGGPCQVIVNRWETHQMPRSLSPS
EPELMIDDGHFGVHNGVECVDSGWLTCQTEIRLRLHYSVKPPVSITKNKFKKSRFRLKLM
LEGVEEEAEESPSSWHEMITTLETSMISDVECKSRHSQPECGYSLVPSKWTEYSIHTMDP
DNLELTFEFFEEDMSEAVVQGDSHPGYVGTSCLLSSSFVESGKDLGVVTLPIMSRNGRQT
IGKVRVDYLVTRPIPGLQCDMSQSFAKYWKKRSALHVGHRGAGSTHAAKHHKIRENTIVS
FLSAANHGAAYVEFDVHLSKDLVPIVYHDLTCCISTKKKNDKNSLVLFEVPVKDLTFDQL
QLLKVAHTTAMEVDDDKDLQDEEEYIYEHQPFPSLSQIFHSVPEHVGFNIELKWISQFKD
GSWDAKLSTYFNMNQFLDIILTCVLQNAGKRRIVFSCFDPDVCTMVRKKQNKYPILFLTQ
GVTDLYPELMDIRCQSTKIAMSFAQSENILGISAHADELLRNMEFIREAQSKGLVVFCWG
DYNNDHENRMKLRDQGIDGLIYDRICDDKLEQSNIFNVEEQIALKDMIQTCACSSYSIPC
CSIPCTGKSQENNGESDSGLSSS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggactgttttcatcaggtctcttcactctcatctccatttgcctgtgtgtcagtcatg
gacagcactagtgtgactctgactgtgagagggaccacagcacgacaaggtgaggtgata
gcagtggttggcagttgtgaaaccctgggcagctggtttcatcaaaaagccgtgccccta
cagccagcggaggaggatggcaccctgtggagaactaccattcaggttcctagagggcgt
gaaaccaaatatcgctatttcaagggattcttttttgaatctaagaacgatggtggtcca
tgtcaagtcatagtcaatagatgggagacccatcagatgccacgctcattgagtccctca
gaaccagagctcatgattgacgatggacactttggagtccataatggcgttgaatgtgtg
gactctggctggttgacgtgccagacagaaattcgtctcaggcttcattactccgtgaaa
cctccagtatctattactaagaataaatttaagaagtcacgcttcagattgaagttgatg
ctggaaggtgttgaggaagaagcagaggaaagcccttcatcatggcatgagatgatcacc
acactggagaccagtatgatcagtgatgttgaatgtaagtctcgtcattcccagccagaa
tgtggatactccctggtaccttccaagtggacagaatacagcattcacaccatggaccct
gacaacctagagctcacctttgagttctttgaggaggacatgagtgaggctgtggttcag
ggtgattcccatccaggctacgtgggcacctcatgcctcttgtcgtcctcttttgtggag
agcggcaaagatttgggtgtggtcaccctgcccatcatgagccgaaacggcagacagact
attggaaaagtcagagtggattacctggtgacgcgtcctatcccaggccttcagtgtgac
atgagtcagtcttttgccaaatactggaagaaaaggagcgctttgcatgttggacacaga
ggagcagggagcacacacgctgccaagcatcacaagatcagagaaaacacaattgtctca
tttctaagtgcagccaaccatggagcagcttatgtagagtttgatgttcatctgtctaaa
gatttagttcctatcgtgtaccacgacctcacctgctgtatttctactaaaaagaaaaat
gacaaaaattcattggtgttgttcgaagttcccgtcaaggatcttacgtttgatcaactt
cagcttttaaaagtggcccatacaactgccatggaagttgatgacgacaaagacttgcaa
gatgaagaggagtatatatatgagcaccagcctttcccttctctttcacagatattccat
tctgttccagaacatgtgggattcaacattgagctgaagtggatctctcagtttaaggat
ggctcctgggatgcaaaactctccacctacttcaacatgaatcagttcttggacatcatt
ctcacatgcgtgctgcagaacgccggcaaaaggaggatagtcttctcatgctttgatcct
gatgtttgcacaatggtaaggaaaaaacagaacaaataccccatcctatttctgacccaa
ggagtgacagacctctaccctgaactcatggacatccgctgtcagagcactaagatcgcc
atgagctttgcccagagtgagaacatactgggaattagcgcccacgctgatgagctcttg
aggaacatggagttcatcagagaggctcagtccaaaggactagtggtcttctgctggggc
gactataacaacgaccatgagaacagaatgaagttgagggaccagggaattgatggcctc
atatatgacagaatctgcgacgacaagctcgagcaatcaaacattttcaatgtagaggaa
cagattgctctcaaggacatgatccaaacgtgtgcctgctcctcctacagtattccctgc
tgctccattccgtgcacagggaaatcccaggagaacaacggggagtcggactccggactc
agttcctcttga
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