Squalius cephalus (European chub): 307168892
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Entry
307168892 CDS
T11930
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
scep Squalius cephalus (European chub)
Pathway
scep04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
307168892 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307168892 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scep04812
]
307168892 (coro1a)
04147 Exosome [BR:
scep04147
]
307168892 (coro1a)
Membrane trafficking [BR:
scep04131
]
Endocytosis
Phagocytosis
Coronins
307168892 (coro1a)
Cytoskeleton proteins [BR:
scep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
307168892 (coro1a)
Exosome [BR:
scep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
307168892 (coro1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1899
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_4
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
PAC11
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Trimer_CC
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
ASA1
Beta-prop_WDR41
WDCP
TRM82_WD
Beta-prop_NUP159_NUP214
CorA
Beta-prop_HPS5
BLOC1_2
Beta-prop_Nup120_160
GAS
UbiJ_C
MYCBP_helical
DUF5798
DNAI3_WD
DUF6779
DUF1664
Motif
Other DBs
NCBI-GeneID:
307168892
NCBI-ProteinID:
XP_079745323
LinkDB
All DBs
Position
1:40225139..40234039
Genome browser
AA seq
455 aa
AA seq
DB search
MSRKVVRTSKFRHVFGQAVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFI
VLPLSKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLISPL
KDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVARGEAVVRIDSVHTDLIYS
ACWNRNGSQILTACKDKKLRVFDPRKGSVIKEKDKPHEGSRPVRAVFVSDGKILTTGFSR
MSERQVALWDPNNLDEPLTLQELDTSSGVLLPFFDPDTGVVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPVVMTVPRKSDLFQE
DLYPDTIGPEPSVEADDWFAGKDGEPILISLKDGFVATTKNKEFKVIKSLMATTSSSSNN
RQSDSGDVQALQNEVKELREMVEQLSKRVSELENN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggaaggtggtcaggaccagtaagttccgccatgtctttggccaggcggtgaag
gcagaccagtgctatgatgacatcaggatctcccagatgacctgggacagcaacttctgc
tccgtcaaccccaagtttgtggccatgattgtggatgccagtggtggaggagcttttatt
gtattgcccctgagcaagacgggtcgcatcgacatgtcccagcccactgtatgtggtcac
actggacccgtattggacattgaattctgcccacataatgacaacatcattgccagtggc
tctgaagactgtagtgtcatgatctgggagattccagagggaggtctcatatcgcccctg
aaggacccagttgtgaagctggaagggcactctaaacgtgtgggcatcctcagctggcac
cccactgcccacaatgtgctaatgagtgcaggctgtgataacgtggtcatcctgtggaat
gtggctcgtggagaggcagtggtgcgcattgactcagtgcacactgatctgatctacagc
gcctgctggaacagaaacggctctcagatccttaccgcctgcaaggacaagaaactacga
gtgttcgacccccgcaagggctccgtcatcaaagagaaggacaagcctcatgaaggttcc
aggccagtcagagctgtgttcgtgtctgacggcaagatcctgaccaccggtttcagccgc
atgagtgagcggcaggtggcgctgtgggatcctaacaacttggatgagcccttgactctg
caggagctggacaccagcagtggagtgctcttacctttctttgaccctgacactggtgtg
gtctacctttgtggcaagggtgacagcagcatcagatactttgaggtgacagacgaggct
ccatacgtccactatctctccatgtacagcagcaaagagagtcagaagggcatgggctac
atgcctaagagaggcctggaagtcaacaagtgtgagattgcaaggttctataaacttcat
gagagaaagtgtgaacctgttgttatgactgtgcctcgtaagtctgacttgtttcaagag
gacctttaccctgacacgattggtccagagccatcggtggaggcagatgattggtttgct
ggtaaagatggggaaccaatcctgatctccttgaaagatggttttgtggctaccaccaaa
aataaagagttcaaagtcatcaaaagcttgatggccacaacatcctcttcctcgaacaac
cgacaatctgacagtggggacgtgcaggctttgcagaatgaggtgaaggagctgagagag
atggttgagcaattgtccaagcgtgtgagcgaactggagaacaattag
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integrated database retrieval system
