Squalius cephalus (European chub): 307169459
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Entry
307169459 CDS
T11930
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 isoform 1
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307169459 (hcn2b)
Ion channels [BR:
scep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
307169459 (hcn2b)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
307169459
NCBI-ProteinID:
XP_079746210
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All DBs
Position
13:complement(19632553..19664614)
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AA seq
971 aa
AA seq
DB search
MDEAEDGDEDHKEILDPSFRMMKNVAPGGGATSRISNNKDFASVSCGRSTESTALLSHGD
VSRSGFDGEEGTGMRCVINGDCRRHDSLSSVLSKQEKQTGGGFPASACHSSTSSMDGSVT
PAPTADKKDSRVSFSNAPPAHGPTPNQPEHSVGFPKSEDGQISADDGETSDNQTYMQRQF
SAMLQPGVNKFSLRMFGSQKAVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVGNLI
IIPVGITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIVYEDNTEIILDPEKIKMKYL
KTWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYI
HQWEEIFHMTYDLASAVMRIINLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVN
DSWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCYAMFIGHATALIQ
SLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNEPLR
EEIVNFNCRKLVASMPLFANADPNFVTAMLTKLRFEVFQPGDYIVREGTIGKKMYFIQHG
VVSILTKGTIGMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPM
MRRAFETVAIDRLDRIGKKNSILMHKVQHDLNTGVFNNRENEMIQEIVKYDREMVKLVKQ
GDMQRPRAMSMSMAPSTHGSMFAPSSQPSTSSAIATLQQAVAMSFCPQMGNTLVGSGAVQ
SPRMVRRFQVVQSQTPPGSQYSTLALASALAGTPVHSPLATTGRTFQYGSSPPGAPSGSQ
LSLVQQHVPSPTHRPLVPRCALSQDDRALSASQPSLPHDMVQPVAPSPPQSTRVSSTSIG
PPQNLPGPAGIRGSIPPRMALPHQMSVGAFPPASLPQMRPSLDSGLPKKDSIISLPETEQ
HHIRSRLSSNL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcggaggacggcgatgaagaccacaaagagatccttgacccttccttcagg
atgatgaagaatgtggcaccaggagggggagcaacgagcaggatctccaacaacaaggac
ttcgcctcggtctcctgtggacgcagcacggaatccaccgcgctcctcagtcacggagat
gtttccagaagcgggtttgacggcgaggagggcaccggaatgagatgcgttatcaacgga
gactgccgaagacacgacagcttgtcctcagtcctctccaagcaggagaagcagacaggt
ggaggcttcccagcatctgcatgtcactccagcacctccagcatggacggctcggtcact
cctgccccgaccgccgacaagaaggactccagggtttccttctccaacgccccccctgcc
cacggaccgaccccgaaccagccggagcattctgtgggctttcccaagtctgaggatggc
cagatctcggcagatgatggggaaaccagtgacaatcaaacttacatgcagaggcagttt
agcgccatgctacagcccggggtcaacaaattctccctgcgtatgtttgggagccaaaag
gctgtggagaaggagcaggaacgagtcaaatccgctggcaactggattattcatccatac
agtgatttcaggttctactgggatttcacaatgctaatgtttatggtgggcaacttgatt
atcattcctgtgggcatcaccttcttcaaggaggagaccaccaccccttggattatcttc
aacgtagtgtccgacacgttcttcctcatggacctggtgctgaacttccgcacgggcatt
gtctacgaagacaacacagagataatactggacccggaaaagatcaagatgaagtacctg
aagacgtggttcgtggtggacttcgtttcatccatcccggtggattatatctttctcatc
gtagagaaaggcatcgactctgaggtttacaagaccgccagggcattgcggatcgtgcgt
ttcaccaagattctcagtttactgcgactacttagactgtccagactgattcgttacatc
catcaatgggaagagatctttcacatgacctatgacctggccagtgcggtgatgcgcatt
atcaatctgattgggatgatgctgctgctgtgccactgggatggctgtctgcagttcctg
gtgcccatgttgcaggacttcccttcggactgttgggtgtcccttaacaagatggtgaat
gactcctggagtgagctgtactcctttgccctgttcaaggccatgagccatatgctgtgc
atcgggtatggacgccaggccccagagagtatgtctgatatctggctgaccatgctgagt
atgatcgtgggagccacctgctacgccatgttcattggtcacgccaccgccctcatacag
tcgttggactcttcccggcgccagtaccaggagaagtacaagcaagtcgagcagtacatg
tctttccacaaacttccggccgacttccggcagaagatccacgactactatgagcacaga
taccagggcaagatgttcgatgaggaaagcattttggaagaattgaacgagccattaaga
gaggaaatagtcaacttcaactgccggaagctggtggcgtccatgccgctcttcgccaac
gcagatcccaactttgtgacagcaatgttaaccaagctccgcttcgaggtcttccaacct
ggagattacatcgttcgagagggaactatcggcaagaagatgtacttcattcagcatggc
gtagtcagcatcctgaccaaagggactatcggcatgaagctctcggatggctcctacttt
ggggagatctgcctgttgacccgtggaagacgaaccgccagcgtgcgggcggacacctac
tgccgactgtactcgctctccgtggacaacttcaatgaagtactggaggagtaccccatg
atgaggagagcgttcgagaccgtagccatcgaccgccttgatcgaataggcaagaagaac
tccatcctgatgcacaaagtacagcacgaccttaacactggcgtcttcaacaaccgtgag
aacgagatgatccaggagattgtgaagtacgatcgggaaatggttaagctagttaaacaa
ggagacatgcagaggcccagggccatgtccatgtccatggctccttcaactcatgggagc
atgtttgcaccttctagtcagccctctacaagttctgccattgctaccctccagcaagct
gttgccatgagcttctgtccccagatgggcaacactcttgtgggttctggggctgtccag
tcaccccgcatggtgcggcgcttccaggtggtccagagccagacacccccaggctcccag
tactccaccttagcccttgcttctgcccttgcaggcacacctgtccatagccctctggca
actaccggtcgaacattccagtatggttccagccccccgggtgcaccctcaggctcccag
ttatcccttgtacagcaacacgtccccagtcccacacatcgaccactggtccccaggtgt
gctttaagccaggatgaccgtgccctatccgcctcccagccatccttaccccatgatatg
gtacagccagttgccccaagccctccccagtcaaccagagtctcttccacttcgatcggt
ccccctcagaacctccccggccctgctggtattagaggaagtattccgccaagaatggca
ctaccccaccaaatgtctgtaggtgcatttcctcctgcctccctcccccagatgagaccc
agtttggattcaggactgcccaagaaggattcaataatcagtctaccagaaactgaacaa
catcacatcagatctagattatcatcaaatttgtga
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