Squalius cephalus (European chub): 307169576
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Entry
307169576 CDS
T11930
Symbol
LOC307169576
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
scep Squalius cephalus (European chub)
Pathway
scep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
307169576 (LOC307169576)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307169576 (LOC307169576)
Ion channels [BR:
scep04040
]
Ligand-gated channels
Serotonin (5-HT3)
307169576 (LOC307169576)
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
307169576
NCBI-ProteinID:
XP_079746436
LinkDB
All DBs
Position
13:<8508064..>8514231
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AA seq
447 aa
AA seq
DB search
MEVTGHNDALLIKSAETINCSEPTSDALLTALKKSIFDKTEIRPVINLKTPTNISVGFTL
YGIFDVDWNIEGLSWDPVECGTKRVSLPRKQLWRPDVVINEFIDENKVPDTYYLYIENTG
KVTDDLPIHVISSCNLDIYTFPFDIQNCSFTFNSYQHTILDVQLFIGRPVEKSLAISLGV
MKTKGEWELVDMLAQKHTIPPQEMNISRDTITYYIVLRRRATLYVVNLLIPSCFLITVDL
FSFLLPPQNVDRSSFKMTLILGYTVFLLLMNDLLPVTGNTLPLINVFFSLCLALMVASLL
ETILIINIQCGSSNYGPLPRWAKVLFLNYLAKLVFLSKKPSDQNCDLEEHRTETQRCDPV
VETPPREAIHNTTPALQELRKISQELLSIRQQVDKHFKTDESAEEWIHLGQVIDRLLFGM
YIIFLSVSFITIFVIWQYWYNKNASLI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgactggacataacgatgctctactaataaaatccgcagagactattaactgc
tccgaacccacctcagatgctctcctaacagccctgaagaagagcatctttgacaaaact
gaaattaggccagttattaacttgaaaactcccacaaacatcagcgtgggcttcacgctg
tatggaattttcgatgtggactggaatattgaaggtttgagttgggatcctgttgaatgt
ggaacaaagagagtctcactgccaagaaaacaactgtggaggcctgatgttgtcatcaat
gaattcattgatgaaaataaagtcccagacacatattacctctacatcgaaaatactggt
aaggtaactgatgatcttccaattcatgtcatcagttcttgcaacctggacatctacacc
tttccattcgatattcagaactgctcattcacctttaattcataccaacacaccattctg
gatgttcagttgttcattggtagaccggtggagaaatcattagcaatttctcttggagta
atgaaaactaaaggagagtgggagctggtcgacatgcttgctcaaaaacataccatacct
ccccaggaaatgaatatctcacgggacacaattacttactatattgtcctcaggcgtcgg
gcaacgctatacgtggtgaacctcctgattcccagctgtttcctcattactgtagatcta
ttcagctttcttctgccacctcagaatgtggatcgatcttccttcaaaatgaccctcatc
ttgggttacactgtgttcctgctgctaatgaacgacctgctgcccgtcacaggaaacacc
ttacctctcataaatgtgtttttctctctctgcttggcactgatggtggccagtcttctg
gagacaattcttatcataaatattcagtgtggctccagtaactatggaccgttacctcga
tgggccaaggtgcttttcctcaactaccttgctaaacttgtttttttaagcaagaaaccc
agtgaccaaaactgtgatcttgaagagcacagaactgagacccaacgctgtgatcctgta
gttgaaacccctccgagagaagcgatccataacacaactcctgctcttcaggaactgagg
aagataagccaggagttactatccatccgtcagcaggtcgataaacattttaaaactgat
gagagcgcagaggagtggatacatttgggtcaagtcattgaccgcttgctttttgggatg
tatattatcttcctctcagtgagtttcatcactatatttgtcatttggcagtactggtac
aacaaaaatgcatctttgatataa
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